estExt_Genewise1.C_260189 (Physcomitrella patens)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 estExt_Genewise1.C_260189 T320979_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.898 0.898
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.898 0.898
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_260189 RWP-RK 430 478

Links

Other RWP-RK family TFs
Other Physcomitrella patens TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.000
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.000
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.000
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.000
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.000
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.000
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.000
UBP1 Bos taurus ENSBTAG00000003968 I 0.000
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.000
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.000
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.000
Aan_R001501 Calypte anna Aan_R001501 I 0.000
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.000
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.000
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.000
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.000
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.000
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.000
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.000
TFCP2 Equus caballus ENSECAG00000020650 I 0.000
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.000
TFCP2 Felis catus ENSFCAG00000030292 I 0.000
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.000
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.000
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.000
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.000
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.000
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.000
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.000
TFCP2 Homo sapiens ENSG00000135457 D 0.000
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.000
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.000
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.000
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.000
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.000
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.000
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.000
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.000
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.000
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.000
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.000
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.000
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.000
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.000
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.000
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.000
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.000
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.000
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.000
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.000
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.000
ubp1 Oryzias latipes ENSORLG00000011706 I 0.000
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.000
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.000
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.000
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.000
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.000
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.000
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.000
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.000
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.000
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.000
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.000
ENSPFOG00000014602 Poecilia formosa ENSPFOG00000014602 N 0.000
Pvit_07635 Pogona vitticeps Pvit_07635 I 0.000
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.000
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.000
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.000
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.000
ENSSHAG00000016282 Sarcophilus harrisii ENSSHAG00000016282 N 0.000
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.000
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.000
UBP1 Sorex araneus ENSSARG00000008670 I 0.000
UBP1 Sus scrofa ENSSSCG00000011235 I 0.000
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.000
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.000
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.000
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.000
Tal_R012945 Tyto alba Tal_R012945 I 0.000
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.000
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.000
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.000