CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.E01022
(
Eucalyptus grandis
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
Eucgr.E01022
T321114_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.918
0.918
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.816
0.816
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.E01022.1
RWP-RK
314
362
CISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKISKV
Links
Other
RWP-RK
family TFs
Other
Eucalyptus grandis
TFs
419 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGUG_04034
Meyerozyma guilliermondii
PGUG_04034
N
0.000