Gorai.008G193400 (Gossypium raimondii)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Gorai.008G193400 T321161_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.776 0.776
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G193400.1 RWP-RK 143 191

Links

Other RWP-RK family TFs
Other Gossypium raimondii TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G09177 Brachypodium distachyon BRADI1G09177 N 0.000
MLOC_74977 Hordeum vulgare MLOC_74977 N 0.000
LPERR03G28140 Leersia perrieri LPERR03G28140 N 0.000
GSMUA_Achr3G29320_001 Musa acuminata GSMUA_Achr3G29320_001 N 0.000
GSMUA_Achr4G11160_001 Musa acuminata GSMUA_Achr4G11160_001 N 0.000
OBART03G33610 Oryza barthii OBART03G33610 N 0.000
OB03G40700 Oryza brachyantha OB03G40700 N 0.000
ORGLA03G0304100 Oryza glaberrima ORGLA03G0304100 N 0.000
BGIOSGA013533 Oryza indica BGIOSGA013533 N 0.000
OLONG_003946 Oryza longistaminata OLONG_003946 N 0.000
OMERI03G31010 Oryza meridionalis OMERI03G31010 N 0.000
ONIVA10G02990 Oryza nivara ONIVA10G02990 N 0.000
OPUNC03G30800 Oryza punctata OPUNC03G30800 N 0.000
ORUFI03G34980 Oryza rufipogon ORUFI03G34980 N 0.000
BHLH148 Oryza sativa OS03G0741100 N 0.000
Pavir.Ia00623 Panicum virgatum Pavir.Ia00623 N 0.000
Pavir.J38335 Panicum virgatum Pavir.J38335 N 0.000
PDK_20s1685261g001 Phoenix dactylifera PDK_20s1685261g001 N 0.000
Si036716m.g Setaria italica Si036716m.g N 0.000
Sb01g008570 Sorghum bicolor Sb01g008570 N 0.000
Traes_5BL_39FD9626E Triticum aestivum Traes_5BL_39FD9626E N 0.000
Traes_5DL_2A286B481 Triticum aestivum Traes_5DL_2A286B481 N 0.000