MDP0000239938 (Malus domestica)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 MDP0000239938 T321192_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000239938 RWP-RK 601 649

Links

Other RWP-RK family TFs
Other Malus domestica TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008058 Ailuropoda melanoleuca ENSAMEG00000008058 I 0.000
ENSAMEG00000009888 Ailuropoda melanoleuca ENSAMEG00000009888 I 0.000
Alligator_sinensis_CCG020787.1 Alligator sinensis Alligator_sinensis_CCG020787.1 I 0.000
ENSAPLG00000015016 Anas platyrhynchos ENSAPLG00000015016 I 0.000
IKZF3 Anolis carolinensis ENSACAG00000003308 I 0.000
IKZF2 Anolis carolinensis ENSACAG00000025864 I 0.000
Afo_R007273 Aptenodytes forsteri Afo_R007273 I 0.000
Afo_R015511 Aptenodytes forsteri Afo_R015511 I 0.000
ENSP00000342876-D1 Bos grunniens ENSP00000342876-D1 I 0.000
ENSP00000418684-D1 Bos grunniens ENSP00000418684-D1 I 0.000
IKZF3 Bos taurus ENSBTAG00000011003 I 0.000
Brh_R001017 Buceros rhinoceros Brh_R001017 I 0.000
IKZF3 Callithrix jacchus ENSCJAG00000008957 I 0.000
IKZF2 Callithrix jacchus ENSCJAG00000011409 I 0.000
Aan_R006146 Calypte anna Aan_R006146 I 0.000
Aan_R015421 Calypte anna Aan_R015421 I 0.000
IKZF2 Canis familiaris ENSCAFG00000014224 I 0.000
IKZF3 Canis familiaris ENSCAFG00000016310 I 0.000
ENSCPOG00000005792 Cavia porcellus ENSCPOG00000005792 I 0.000
IKZF2 Cavia porcellus ENSCPOG00000013506 I 0.000
Cmyd_10006949 Chelonia mydas Cmyd_10006949 I 0.000
Cmyd_10012463 Chelonia mydas Cmyd_10012463 I 0.000
Cmyd_10015871 Chelonia mydas Cmyd_10015871 I 0.000
ENSCSAG00000002731 Chlorocebus sabaeus ENSCSAG00000002731 I 0.000
IKZF3 Dasypus novemcinctus ENSDNOG00000015682 I 0.000
Ikzf2 Dipodomys ordii ENSDORG00000007539 I 0.000
IKZF2 Echinops telfairi ENSETEG00000019814 I 0.000
IKZF3 Equus caballus ENSECAG00000007441 I 0.000
IKZF2 Erinaceus europaeus ENSEEUG00000001089 I 0.000
IKZF2 Felis catus ENSFCAG00000009654 I 0.000
IKZF3 Felis catus ENSFCAG00000030732 I 0.000
ENSFALG00000000489 Ficedula albicollis ENSFALG00000000489 I 0.000
ENSFALG00000012948 Ficedula albicollis ENSFALG00000012948 I 0.000
ENSGMOG00000012959 Gadus morhua ENSGMOG00000012959 I 0.000
IKZF2 Gallus gallus ENSGALG00000003136 I 0.000
IKZF3 Gasterosteus aculeatus ENSGACG00000018123 I 0.000
Gfo_R012078 Geospiza fortis Gfo_R012078 I 0.000
Gfo_R016268 Geospiza fortis Gfo_R016268 I 0.000
IKZF3 Gorilla gorilla ENSGGOG00000009814 I 0.000
IKZF2 Gorilla gorilla ENSGGOG00000011301 I 0.000
IKZF2 Homo sapiens ENSG00000030419 D 0.000
IKZF3 Homo sapiens ENSG00000161405 D 0.000
ENSSTOG00000003804 Ictidomys tridecemlineatus ENSSTOG00000003804 I 0.000
ENSSTOG00000011683 Ictidomys tridecemlineatus ENSSTOG00000011683 I 0.000
ENSLACG00000011419 Latimeria chalumnae ENSLACG00000011419 I 0.000
ENSLOCG00000013557 Lepisosteus oculatus ENSLOCG00000013557 I 0.000
IKZF3 Loxodonta africana ENSLAFG00000000289 I 0.000
IKZF2 Loxodonta africana ENSLAFG00000008236 I 0.000
ENSP00000342876 Macaca fascicularis ENSP00000342876 I 0.000
ENSP00000418684 Macaca fascicularis ENSP00000418684 I 0.000
IKZF2 Macaca mulatta ENSMMUG00000000381 I 0.000
IKZF3 Macaca mulatta ENSMMUG00000017337 I 0.000
ENSMEUG00000000683 Macropus eugenii ENSMEUG00000000683 I 0.000
ENSMGAG00000003697 Meleagris gallopavo ENSMGAG00000003697 I 0.000
IKZF3 Microcebus murinus ENSMICG00000010571 I 0.000
IKZF2 Microcebus murinus ENSMICG00000013862 I 0.000
IKZF3 Monodelphis domestica ENSMODG00000012901 I 0.000
ENSMPUG00000014968 Mustela putorius furo ENSMPUG00000014968 I 0.000
Ikzf3 Mus musculus ENSMUSG00000018168 I 0.000
Ikzf2 Mus musculus ENSMUSG00000025997 I 0.000
IKZF3 Myotis lucifugus ENSMLUG00000003323 I 0.000
IKZF2 Myotis lucifugus ENSMLUG00000012494 I 0.000
ENSNLEG00000001118 Nomascus leucogenys ENSNLEG00000001118 I 0.000
ENSNLEG00000007199 Nomascus leucogenys ENSNLEG00000007199 I 0.000
ENSOPRG00000009026 Ochotona princeps ENSOPRG00000009026 I 0.000
ENSONIG00000009010 Oreochromis niloticus ENSONIG00000009010 I 0.000
ENSONIG00000010379 Oreochromis niloticus ENSONIG00000010379 I 0.000
IKZF3 Ornithorhynchus anatinus ENSOANG00000003623 I 0.000
IKZF3 Oryctolagus cuniculus ENSOCUG00000001355 I 0.000
IKZF2 Oryctolagus cuniculus ENSOCUG00000007309 I 0.000
IKZF3 Oryzias latipes ENSORLG00000002674 I 0.000
IKZF3 Otolemur garnettii ENSOGAG00000007067 I 0.000
IKZF2 Otolemur garnettii ENSOGAG00000016680 I 0.000
ENSOARG00000012131 Ovis aries ENSOARG00000012131 I 0.000
ENSOARG00000019252 Ovis aries ENSOARG00000019252 I 0.000
IKZF3 Pan troglodytes ENSPTRG00000009103 I 0.000
IKZF2 Pan troglodytes ENSPTRG00000012884 I 0.000
ENSPANG00000016694 Papio anubis ENSPANG00000016694 I 0.000
ENSPANG00000021743 Papio anubis ENSPANG00000021743 I 0.000
ENSPSIG00000009682 Pelodiscus sinensis ENSPSIG00000009682 I 0.000
ENSPSIG00000014940 Pelodiscus sinensis ENSPSIG00000014940 I 0.000
ENSPSIG00000016492 Pelodiscus sinensis ENSPSIG00000016492 I 0.000
ENSPFOG00000013807 Poecilia formosa ENSPFOG00000013807 I 0.000
Pvit_07651 Pogona vitticeps Pvit_07651 I 0.000
Pvit_13083 Pogona vitticeps Pvit_13083 I 0.000
ENSPPYG00000008476 Pongo abelii ENSPPYG00000008476 I 0.000
ENSPPYG00000013139 Pongo abelii ENSPPYG00000013139 I 0.000
IKZF3 Pteropus vampyrus ENSPVAG00000008536 I 0.000
IKZF2 Pteropus vampyrus ENSPVAG00000014197 I 0.000
Ikzf3 Rattus norvegicus ENSRNOG00000007200 I 0.000
Ikzf2 Rattus norvegicus ENSRNOG00000027430 I 0.000
ENSSHAG00000014629 Sarcophilus harrisii ENSSHAG00000014629 I 0.000
IKZF2 Sus scrofa ENSSSCG00000016164 I 0.000
IKZF3 Sus scrofa ENSSSCG00000017494 I 0.000
IKZF3 Taeniopygia guttata ENSTGUG00000002245 I 0.000
IKZF2 Taeniopygia guttata ENSTGUG00000002874 I 0.000
IKZF3 Takifugu rubripes ENSTRUG00000005964 I 0.000
ikzf1 Takifugu rubripes ENSTRUG00000017779 I 0.000
ENSTSYG00000006472 Tarsius syrichta ENSTSYG00000006472 I 0.000
ENSTNIG00000014148 Tetraodon nigroviridis ENSTNIG00000014148 I 0.000
IKZF2 Tupaia belangeri ENSTBEG00000010122 I 0.000
IKZF3 Tupaia belangeri ENSTBEG00000012590 I 0.000
IKZF3 Tursiops truncatus ENSTTRG00000008224 I 0.000
Tal_R002368 Tyto alba Tal_R002368 I 0.000
IKZF3 Vicugna pacos ENSVPAG00000001706 I 0.000
IKZF2 Vicugna pacos ENSVPAG00000004262 I 0.000
ikzf2.S Xenopus laevis XB-GENE-17346220 I 0.000
ikzf3.L Xenopus laevis XB-GENE-994463 I 0.000
ikzf2 Xenopus tropicalis XB-GENE-1013632 I 0.000
XP_002940416 Xenopus tropicalis XP_002940416 I 0.000
ENSXMAG00000018173 Xiphophorus maculatus ENSXMAG00000018173 I 0.000