SapurV1A.0016s0650 (Salix purpurea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 SapurV1A.0016s0650 T321242_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.939 0.939
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0016s0650.1.p RWP-RK 615 663
SapurV1A.0016s0650.2.p RWP-RK 615 663
SapurV1A.0016s0650.3.p RWP-RK 615 663
SapurV1A.0016s0650.4.p RWP-RK 615 663
SapurV1A.0016s0650.5.p RWP-RK 615 663
SapurV1A.0016s0650.6.p RWP-RK 615 663

Links

Other RWP-RK family TFs
Other Salix purpurea TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.000
OBART05G01640 Oryza barthii OBART05G01640 N 0.000
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.000