Thhalv10019554m.g (Eutrema salsugineum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Thhalv10019554m.g T321270_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.898 0.898
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.898 0.898
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10019554m RWP-RK 130 178

Links

Other RWP-RK family TFs
Other Eutrema salsugineum TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009609 Aedes aegypti AAEL009609 N 0.000
AAEL014143 Aedes aegypti AAEL014143 N 0.000
AALB005681 Anopheles albimanus AALB005681 N 0.000
AARA007588 Anopheles arabiensis AARA007588 N 0.000
AATE006102 Anopheles atroparvus AATE006102 N 0.000
ACHR009157 Anopheles christyi ACHR009157 N 0.000
ACOM024924 Anopheles coluzzii ACOM024924 N 0.000
ACUA004415 Anopheles culicifacies ACUA004415 N 0.000
ADIR003886 Anopheles dirus ADIR003886 N 0.000
AEPI010862 Anopheles epiroticus AEPI010862 N 0.000
AFAF019115 Anopheles farauti AFAF019115 N 0.000
AFUN004771 Anopheles funestus AFUN004771 N 0.000
AGAP005930 Anopheles gambiae AGAP005930 N 0.000
AMAM008816 Anopheles maculatus AMAM008816 N 0.000
AMEC017519 Anopheles melas AMEC017519 N 0.000
AMEC000297 Anopheles melas AMEC000297 N 0.000
AMEM005482 Anopheles merus AMEM005482 N 0.000
AMIN010696 Anopheles minimus AMIN010696 N 0.000
AQUA005579 Anopheles quadriannulatus AQUA005579 N 0.000
ASTEI02773 Anopheles stephensi ASTEI02773 N 0.000
GB40611 Apis mellifera GB40611 N 0.000
ACEP10018 Atta cephalotes ACEP10018 N 0.000
BGIBMGA004680 Bombyx mori BGIBMGA004680 N 0.000
Cflo_08960--XP_001120974.1_APIME Camponotus floridanus Cflo_08960--XP_001120974.1_APIME N 0.000
CLEC009121 Cimex lectularius CLEC009121 N 0.000
CpipJ_CPIJ009873 Culex pipiens CpipJ_CPIJ009873 I 0.000
CPIJ009873 Culex quinquefasciatus CPIJ009873 I 0.000
KGM_19443 Danaus plexippus KGM_19443 N 0.000
YQE_06248 Dendroctonus ponderosae YQE_06248 N 0.000
HHAL003570-PA Halyomorpha halys HHAL003570-PA N 0.000
Hsal_12374--XP_001120974.1_APIME Harpegnathos saltator Hsal_12374--XP_001120974.1_APIME N 0.000
MCINX001572 Melitaea cinxia MCINX001572 N 0.000
NV11815 Nasonia vitripennis NV11815 N 0.000
PPAI004034 Phlebotomus papatasi PPAI004034 N 0.000
RPRC013552 Rhodnius prolixus RPRC013552 N 0.000
SINV21318 Solenopsis invicta SINV21318 N 0.000
TC013793 Tribolium castaneum TC013793 I 0.000
L798_14901 Zootermopsis nevadensis L798_14901 N 0.000