Thhalv10022536m.g (Eutrema salsugineum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Thhalv10022536m.g T321271_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.918 0.918
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10022536m RWP-RK 610 658

Links

Other RWP-RK family TFs
Other Eutrema salsugineum TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018175 Ailuropoda melanoleuca ENSAMEG00000018175 N 0.000
ENSP00000389716-D1 Bos grunniens ENSP00000389716-D1 N 0.000
MXD3 Bos taurus ENSBTAG00000005010 N 0.000
ENSCJAG00000006943 Callithrix jacchus ENSCJAG00000006943 N 0.000
MXD3 Canis familiaris ENSCAFG00000016437 N 0.000
ENSCSAG00000008875 Chlorocebus sabaeus ENSCSAG00000008875 N 0.000
MXD3 Dasypus novemcinctus ENSDNOG00000017403 N 0.000
MXD3 Echinops telfairi ENSETEG00000010972 N 0.000
MXD3 Equus caballus ENSECAG00000021155 N 0.000
MXD3 Erinaceus europaeus ENSEEUG00000015798 N 0.000
MXD3 Felis catus ENSFCAG00000001533 N 0.000
ENSGGOG00000011764 Gorilla gorilla ENSGGOG00000011764 N 0.000
MXD3 Homo sapiens ENSG00000213347 N 0.000
ENSSTOG00000002697 Ictidomys tridecemlineatus ENSSTOG00000002697 N 0.000
MXD3 Loxodonta africana ENSLAFG00000021836 N 0.000
ENSMMUP00000033662 Macaca fascicularis ENSMMUP00000033662 N 0.000
ENSMMUG00000009047 Macaca mulatta ENSMMUG00000009047 N 0.000
ENSMEUG00000002831 Macropus eugenii ENSMEUG00000002831 N 0.000
MXD3 Monodelphis domestica ENSMODG00000004791 N 0.000
ENSMPUG00000012200 Mustela putorius furo ENSMPUG00000012200 N 0.000
Mxd3 Mus musculus ENSMUSG00000021485 N 0.000
Myotis_brandtii_MXD3_10032506 Myotis brandtii Myotis_brandtii_MXD3_10032506 N 0.000
ENSMLUG00000007019 Myotis lucifugus ENSMLUG00000007019 N 0.000
ENSNLEG00000012726 Nomascus leucogenys ENSNLEG00000012726 N 0.000
MXD3 Ochotona princeps ENSOPRG00000002125 N 0.000
MXD3 Oryctolagus cuniculus ENSOCUG00000022519 N 0.000
MXD3 Otolemur garnettii ENSOGAG00000032370 N 0.000
ENSOARG00000004235 Ovis aries ENSOARG00000004235 N 0.000
MXD3 Pan troglodytes ENSPTRG00000034491 N 0.000
ENSPANG00000007888 Papio anubis ENSPANG00000007888 N 0.000
MXD3 Pteropus vampyrus ENSPVAG00000003828 N 0.000
Rab24 Rattus norvegicus ENSRNOG00000016539 N 0.000
MXD3 Sus scrofa ENSSSCG00000014041 N 0.000
MXD3 Tursiops truncatus ENSTTRG00000009572 N 0.000