Thhalv10024328m.g (Eutrema salsugineum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Thhalv10024328m.g T321274_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		1.000 1.000
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10024328m RWP-RK 589 637
Thhalv10024493m RWP-RK 389 437

Links

Other RWP-RK family TFs
Other Eutrema salsugineum TFs

417 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AER159C Ashbya gossypii AGOS_AER159C I
CAGL0H04213g Candida glabrata CAGL0H04213g I
CAGL0M00594g Candida glabrata CAGL0M00594g I
KAFR_0B06810 Kazachstania africana KAFR_0B06810 I
KAFR_0E04270 Kazachstania africana KAFR_0E04270 I
KNAG_0M00350 Kazachstania naganishii KNAG_0M00350 I
KLLA0_B04477g Kluyveromyces lactis KLLA0_B04477g I
KLTH0D18062g Kluyveromyces thermotolerans KLTH0D18062g I
Kwal_16621 Kluyveromyces waltii Kwal_16621 I
SAKL0G18062g Lachancea kluyveri SAKL0G18062g I
LALA0_S08e05644g Lachancea lanzarotensis LALA0_S08e05644g I
KLTH0D18062g Lachancea thermotolerans KLTH0D18062g I
NCAS_0A06250 Naumovozyma castellii NCAS_0A06250 I
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I
NDAI_0J02850 Naumovozyma dairenensis NDAI_0J02850 I
SU7_2441 Saccharomyces arboricola SU7_2441 I
18114_YML081W Saccharomyces bayanus 18114_YML081W I
13784_YJR127C Saccharomyces bayanus 13784_YJR127C I
Scas_Contig703.23 Saccharomyces castellii Scas_Contig703.23 I
RSF2 Saccharomyces cerevisiae YJR127C D
TDA9 Saccharomyces cerevisiae YML081W D
SKUD_162303 Saccharomyces kudriavzevii SKUD_162303 I
16099_Multiple Saccharomyces mikatae 16099_Multiple I
12664_YJR127C Saccharomyces mikatae 12664_YJR127C I
17638_YML081W Saccharomyces paradoxus 17638_YML081W I
12764_Multiple Saccharomyces paradoxus 12764_Multiple I
AACERI_AaceriAER159C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER159C I
TBLA_0E04770 Tetrapisispora blattae TBLA_0E04770 I
TBLA_0B06160 Tetrapisispora blattae TBLA_0B06160 I
TPHA_0B00380 Tetrapisispora phaffii TPHA_0B00380 I
TDEL_0D00670 Torulaspora delbrueckii TDEL_0D00670 I
ZBAI_03168 Zygosaccharomyces bailii ZBAI_03168 I
ZBAI_03167 Zygosaccharomyces bailii ZBAI_03167 I
ZYRO0B14894g Zygosaccharomyces rouxii ZYRO0B14894g I