CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava45931.m1
(
Manihot esculenta
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04689 (S1FA)
IPR006779
cassava45931.m1
T321468_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
S1FA3
M07252_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT3G09735_col_a
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava45931.m1
S1FA
6
71
DIEAKGFNPGLIVLLLVGGLVLTFLIGNYALYVYAQKTLPPKKKKPISKKKMKRERLKHGVSAPGE
Links
Other
S1FA
family TFs
Other
Manihot esculenta
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000019872
Ailuropoda melanoleuca
ENSAMEG00000019872
I
0.000
ZBED6
Bos taurus
ENSBTAG00000045702
I
0.000
ZBED6
Canis familiaris
ENSCAFG00000009578
I
0.000
ENSCSAG00000000255
Chlorocebus sabaeus
ENSCSAG00000000255
I
0.000
ZBED6
Dasypus novemcinctus
ENSDNOG00000049271
I
0.000
ZBED6
Equus caballus
ENSECAG00000005666
I
0.000
ZBED6
Felis catus
ENSFCAG00000028686
I
0.000
ZBED6
Gorilla gorilla
ENSGGOG00000024666
I
0.000
ZBED6
Homo sapiens
ENSG00000257315
I
0.000
ZBED6
Loxodonta africana
ENSLAFG00000029775
I
0.000
ENSMMUP00000038109
Macaca fascicularis
ENSMMUP00000038109
I
0.000
ENSMMUG00000031370
Macaca mulatta
ENSMMUG00000031370
I
0.000
ENSMPUG00000019262
Mustela putorius furo
ENSMPUG00000019262
I
0.000
Gm38394
Mus musculus
ENSMUSG00000094410
I
0.000
Zbed6
Mus musculus
ENSMUSG00000102049
D
0.000
ZBED6
Myotis lucifugus
ENSMLUG00000024783
I
0.000
ZBED6
Oryctolagus cuniculus
ENSOCUG00000024739
I
0.000
ZBED6
Otolemur garnettii
ENSOGAG00000032362
I
0.000
ENSOARG00000004947
Ovis aries
ENSOARG00000004947
I
0.000
ENSPANG00000018009
Papio anubis
ENSPANG00000018009
I
0.000
ENSPSIG00000001968
Pelodiscus sinensis
ENSPSIG00000001968
I
0.000
ENSSSCG00000015274
Sus scrofa
ENSSSCG00000015274
I
0.000