CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM03G12620
(
Oryza glumaepatula
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
OGLUM03G12620
T322034_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM03G12620.1
SAND
612
672
HPMLFKEGGLPDYTLLTYKLKNGEYTPSQFEKHVGMGRRRQPYRSIYTSDGLTLHELALKL
OGLUM03G12620.2
SAND
643
703
HPMLFKEGGLPDYTLLTYKLKNGEYTPSQFEKHVGMGRRRQPYRSIYTSDGLTLHELALKL
Links
Other
SAND
family TFs
Other
Oryza glumaepatula
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G45260
Oryza barthii
OBART01G45260
N
ORGLA01G0390500
Oryza glaberrima
ORGLA01G0390500
N
OMERI01G42070
Oryza meridionalis
OMERI01G42070
N
ONIVA01G51530
Oryza nivara
ONIVA01G51530
N
OPUNC01G44220
Oryza punctata
OPUNC01G44220
N
ORUFI01G48730
Oryza rufipogon
ORUFI01G48730
N
DREB1F
Oryza sativa
OS01G0968800
N
Si002846m.g
Setaria italica
Si002846m.g
N
Sb03g047170
Sorghum bicolor
Sb03g047170
N
GRMZM2G097182
Zea mays
GRMZM2G097182
N