CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30032927m.g
(
Saccoglossus kowalevskii
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
Sakowv30032927m.g
T322229_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.883
0.658
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.883
0.658
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23944359_peptide
SAND
130
205
SVHLPVLPVRCKNQSAELHKVKLGSGGRGRCVKMADQWYTPSEFEALCGRGNSKDWKRSIRYGGRTLQCLIEEGIL
23944360_peptide
SAND
130
205
SVHLPVLPVRCKNQSAELHKVKLGSGGRGRCVKMADQWYTPSEFEALCGRGNSKDWKRSIRYGGRTLQCLIEEGIL
23944361_peptide
SAND
130
205
SVHLPVLPVRCKNQSAELHKVKLGSGGRGRCVKMADQWYTPSEFEALCGRGNSKDWKRSIRYGGRTLQCLIEEGIL
23944362_peptide
SAND
130
205
SVHLPVLPVRCKNQSAELHKVKLGSGGRGRCVKMADQWYTPSEFEALCGRGNSKDWKRSIRYGGRTLQCLIEEGIL
Links
Other
SAND
family TFs
Other
Saccoglossus kowalevskii
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI005878
Acyrthosiphon pisum
ACYPI005878
N
0.871
ACYPI29974
Acyrthosiphon pisum
ACYPI29974
N
0.891
ACYPI34776
Acyrthosiphon pisum
ACYPI34776
N
0.902
AAEL013408
Aedes aegypti
AAEL013408
I
0.914
ENSAMEG00000010672
Ailuropoda melanoleuca
ENSAMEG00000010672
I
0.883
Alligator_sinensis_CCG021031.1
Alligator sinensis
Alligator_sinensis_CCG021031.1
I
0.883
ENSAPLG00000011215
Anas platyrhynchos
ENSAPLG00000011215
I
0.892
DEAF1
Anolis carolinensis
ENSACAG00000015102
I
0.898
AALB004583
Anopheles albimanus
AALB004583
I
0.890
AARA003510
Anopheles arabiensis
AARA003510
I
0.890
AATE015987
Anopheles atroparvus
AATE015987
I
0.890
ACHR007416
Anopheles christyi
ACHR007416
I
0.890
ACOM036369
Anopheles coluzzii
ACOM036369
I
0.890
ACUA011008
Anopheles culicifacies
ACUA011008
I
0.890
ADAC006957
Anopheles darlingi
ADAC006957
I
0.890
ADIR001685
Anopheles dirus
ADIR001685
I
0.890
AEPI005273
Anopheles epiroticus
AEPI005273
I
0.890
AFAF013455
Anopheles farauti
AFAF013455
I
0.890
AFUN005053
Anopheles funestus
AFUN005053
I
0.890
AGAP004905
Anopheles gambiae
AGAP004905
I
0.890
AMAM018568
Anopheles maculatus
AMAM018568
I
0.886
AMEC000569
Anopheles melas
AMEC000569
I
0.890
AMEM010249
Anopheles merus
AMEM010249
I
0.890
AMIN011402
Anopheles minimus
AMIN011402
I
0.890
AQUA000322
Anopheles quadriannulatus
AQUA000322
I
0.890
ASIS014192
Anopheles sinensis
ASIS014192
I
0.890
ASTEI10643
Anopheles stephensi
ASTEI10643
I
0.886
GB41654
Apis mellifera
GB41654
I
0.905
Afo_R011879
Aptenodytes forsteri
Afo_R011879
I
0.892
ACEP13992
Atta cephalotes
ACEP13992
I
0.886
BGLB009094
Biomphalaria glabrata
BGLB009094
I
0.876
BGIBMGA002019
Bombyx mori
BGIBMGA002019
I
0.939
ENSP00000371846-D1
Bos grunniens
ENSP00000371846-D1
I
0.883
fgenesh2_pg.scaffold_59000067
Branchiostoma floridae
fgenesh2_pg.scaffold_59000067
I
0.938
fgenesh2_pg.scaffold_59000072
Branchiostoma floridae
fgenesh2_pg.scaffold_59000072
I
0.938
DEAF1
Callithrix jacchus
ENSCJAG00000011996
I
0.883
Aan_R010721
Calypte anna
Aan_R010721
I
0.892
Cflo_07037--XP_395757.2_APIME
Camponotus floridanus
Cflo_07037--XP_395757.2_APIME
I
0.881
DEAF1
Canis familiaris
ENSCAFG00000006569
I
0.883
CapteG228571
Capitella teleta
CapteG228571
I
0.956
DEAF1
Cavia porcellus
ENSCPOG00000006073
I
0.883
Cmyd_10004045
Chelonia mydas
Cmyd_10004045
I
0.883
ENSCSAG00000010763
Chlorocebus sabaeus
ENSCSAG00000010763
I
0.883
CLEC001236
Cimex lectularius
CLEC001236
I
0.883
CGI_10012910
Crassostrea gigas
CGI_10012910
I
0.896
CpipJ_CPIJ007045
Culex pipiens
CpipJ_CPIJ007045
I
0.904
CPIJ007045
Culex quinquefasciatus
CPIJ007045
I
0.904
KGM_18605
Danaus plexippus
KGM_18605
I
0.927
DEAF1
Dasypus novemcinctus
ENSDNOG00000000274
I
0.883
YQE_06816
Dendroctonus ponderosae
YQE_06816
I
0.935
Deaf1
Dipodomys ordii
ENSDORG00000015737
I
0.883
GI11644
Drosophila mojavensis
FBgn0134404
I
0.848
DEAF1
Equus caballus
ENSECAG00000010151
I
0.883
DEAF1
Felis catus
ENSFCAG00000007591
I
0.883
ENSFALG00000010923
Ficedula albicollis
ENSFALG00000010923
I
0.892
ENSGALG00000005089
Gallus gallus
ENSGALG00000005089
I
0.892
Gfo_R011899
Geospiza fortis
Gfo_R011899
I
0.892
DEAF1
Gorilla gorilla
ENSGGOG00000014020
I
0.883
HHAL006904-PA
Halyomorpha halys
HHAL006904-PA
I
0.882
Hsal_03559--XP_395757.2_APIME
Harpegnathos saltator
Hsal_03559--XP_395757.2_APIME
I
0.867
HMEL013517
Heliconius melpomene
HMEL013517
I
0.925
DEAF1
Homo sapiens
ENSG00000177030
I
0.883
ENSSTOG00000004165
Ictidomys tridecemlineatus
ENSSTOG00000004165
I
0.883
ISCW003915
Ixodes scapularis
ISCW003915
I
0.956
ENSLACG00000014207
Latimeria chalumnae
ENSLACG00000014207
I
0.848
LDEC013410
Leptinotarsa decemlineata
LDEC013410
I
0.917
LotgiG168359
Lottia gigantea
LotgiG168359
I
0.886
DEAF1
Loxodonta africana
ENSLAFG00000023242
I
0.883
LCUP007674
Lucilia cuprina
LCUP007674
I
0.851
LLOJ006782
Lutzomyia longipalpis
LLOJ006782
I
0.885
ENSP00000371846
Macaca fascicularis
ENSP00000371846
I
0.883
DEAF1
Macaca mulatta
ENSMMUG00000002660
I
0.883
ENSMEUG00000005016
Macropus eugenii
ENSMEUG00000005016
I
0.888
DEAF1
Meleagris gallopavo
ENSMGAG00000003765
I
0.892
MCINX013640
Melitaea cinxia
MCINX013640
I
0.928
DEAF1
Microcebus murinus
ENSMICG00000001602
I
0.845
MDOA003373
Musca domestica
MDOA003373
I
0.855
ENSMPUG00000008992
Mustela putorius furo
ENSMPUG00000008992
I
0.883
Deaf1
Mus musculus
ENSMUSG00000058886
I
0.883
Myotis_brandtii_DEAF1_10008461
Myotis brandtii
Myotis_brandtii_DEAF1_10008461
I
0.883
DEAF1
Myotis lucifugus
ENSMLUG00000026576
I
0.883
NV18168
Nasonia vitripennis
NV18168
I
0.888
ENSNLEG00000008479
Nomascus leucogenys
ENSNLEG00000008479
I
0.883
ENSOPRG00000002240
Ochotona princeps
ENSOPRG00000002240
I
0.888
Ocbimv22013386m.g
Octopus bimaculoides
Ocbimv22013386m.g
I
0.896
Ogr05554
Ophisaurus gracilis
Ogr05554
I
0.892
DEAF1
Otolemur garnettii
ENSOGAG00000006434
I
0.883
ENSOARG00000006285
Ovis aries
ENSOARG00000006285
I
0.883
DEAF1
Pan troglodytes
ENSPTRG00000003129
D
0.883
ENSPANG00000008597
Papio anubis
ENSPANG00000008597
I
0.883
PHUM581340
Pediculus humanus
PHUM581340
I
0.880
ENSPSIG00000016545
Pelodiscus sinensis
ENSPSIG00000016545
I
0.883
ENSPMAG00000004264
Petromyzon marinus
ENSPMAG00000004264
I
0.888
PPAI007052
Phlebotomus papatasi
PPAI007052
I
0.885
Pvit_08245
Pogona vitticeps
Pvit_08245
I
0.892
DEAF1
Pteropus vampyrus
ENSPVAG00000006883
I
0.897
Deaf1
Rattus norvegicus
ENSRNOG00000017960
I
0.883
RPRC001228
Rhodnius prolixus
RPRC001228
I
0.895
ENSSHAG00000002042
Sarcophilus harrisii
ENSSHAG00000002042
I
0.888
SINV20880
Solenopsis invicta
SINV20880
I
0.886
SMAR003119
Strigamia maritima
SMAR003119
I
0.913
SPU_014381
Strongylocentrotus purpuratus
SPU_014381
N
0.978
DEAF1
Sus scrofa
ENSSSCG00000012850
I
0.883
DEAF1
Taeniopygia guttata
ENSTGUG00000007185
I
0.892
TC000085
Tribolium castaneum
TC000085
I
0.937
DEAF1
Tursiops truncatus
ENSTTRG00000015418
I
0.883
deaf1
Xenopus tropicalis
XB-GENE-1216227
I
0.905
L798_01684
Zootermopsis nevadensis
L798_01684
I
0.937