Pavir.Ib01291 (Panicum virgatum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pavir.Ib01291 T322268_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01291.10.p SAND 30 102
Pavir.Ib01291.10.p SAND 564 628
Pavir.Ib01291.11.p SAND 30 102
Pavir.Ib01291.11.p SAND 565 629
Pavir.Ib01291.12.p SAND 30 102
Pavir.Ib01291.12.p SAND 565 629
Pavir.Ib01291.13.p SAND 564 628
Pavir.Ib01291.14.p SAND 565 629
Pavir.Ib01291.15.p SAND 30 102
Pavir.Ib01291.15.p SAND 564 628
Pavir.Ib01291.16.p SAND 30 102
Pavir.Ib01291.16.p SAND 565 629
Pavir.Ib01291.1.p SAND 565 629
Pavir.Ib01291.2.p SAND 442 506
Pavir.Ib01291.3.p SAND 443 507
Pavir.Ib01291.4.p SAND 442 506
Pavir.Ib01291.5.p SAND 443 507
Pavir.Ib01291.6.p SAND 564 628
Pavir.Ib01291.7.p SAND 564 628
Pavir.Ib01291.8.p SAND 565 629
Pavir.Ib01291.9.p SAND 30 102
Pavir.Ib01291.9.p SAND 564 628

Links

Other SAND family TFs
Other Panicum virgatum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART10G09330 Oryza barthii OBART10G09330 N
ORGLA10G0079800 Oryza glaberrima ORGLA10G0079800 N
ILI7 Oryza indica BGIOSGA032878 N
OLONG_006553 Oryza longistaminata OLONG_006553 N
OMERI10G06590 Oryza meridionalis OMERI10G06590 N
ONIVA03G20270 Oryza nivara ONIVA03G20270 N
ORUFI10G09730 Oryza rufipogon ORUFI10G09730 N
ILI7 Oryza sativa OS10G0404300 N