SPL10 (Arabidopsis lyrata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 fgenesh2_kg.1__2893__AT1G27370.2 T322550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.982 0.960
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.982 0.960
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.981 0.960
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__2893__AT1G27370.2 SBP 176 250

Links

Other SBP family TFs
Other Arabidopsis lyrata TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV04_03384 Capronia semiimmersa PV04_03384 N
G647_05188 Cladophialophora carrionii G647_05188 N
CGGC5_7571 Colletotrichum gloeosporioides CGGC5_7571 N
CCM_01638 Cordyceps militaris CCM_01638 N
CCM_09227 Cordyceps militaris CCM_09227 I
HMPREF1541_05522 Cyphellophora europaea HMPREF1541_05522 N
FFUJ_08424 Fusarium fujikuroi FFUJ_08424 N
FOXG_08746 Fusarium oxysporum FOXG_08746 N
FPSE_08824 Fusarium pseudograminearum FPSE_08824 N
NechaG80102 Fusarium solani NechaG80102 N
NechaG80151 Fusarium solani NechaG80151 N
GGTG_09020 Gaeumannomyces graminis GGTG_09020 N
LEMA_P109100.1 Leptosphaeria maculans LEMA_P109100.1 N
X797_011070 Metarhizium robertsii X797_011070 N
fgenesh1_pg.sca_12_chr5_2_0000331 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000331 N
fgenesh1_pg.sca_12_chr5_2_0000282 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000282 N
NFIA_072260 Neosartorya fischeri CADNFIAG00006741 N
OIDMADRAFT_204080 Oidiodendron maius OIDMADRAFT_204080 I
OIDMADRAFT_45112 Oidiodendron maius OIDMADRAFT_45112 N
Pc13g06530 Penicillium chrysogenum Pc13g06530 N
PEX1_099950 Penicillium expansum PEX1_099950 N
PITC_065540 Penicillium italicum PITC_065540 N
PMAA_073800 Penicillium marneffei PMAA_073800 N
PCH_Pc13g06530 Penicillium rubens PCH_Pc13g06530 N
U727_00430311331 Penicillium solitum U727_00430311331 N
V499_06431 Pseudogymnoascus pannorum V499_06431 N
SS1G_02054 Sclerotinia sclerotiorum SS1G_02054 N
SPBR_02468 Sporothrix brasiliensis SPBR_02468 N
PMAA_073800 Talaromyces marneffei PMAA_073800 N
VHEMI09976 Torrubiella hemipterigena VHEMI09976 N
TRIVIDRAFT_149245 Trichoderma virens TRIVIDRAFT_149245 N
TRIVIDRAFT_189391 Trichoderma virens TRIVIDRAFT_189391 N
PV09_04169 Verruconis gallopava PV09_04169 N