GLYMA07G19770 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA07G19770 T322573_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.970 0.893
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.970 0.893
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.970 0.893
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.970 0.893
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.967 0.880
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.962 0.813
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.960 0.813
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.957 0.907
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.950 0.787
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.950 0.787
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.950 0.787
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.941 0.720
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.939 0.747
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.928 0.707
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.928 0.707
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.928 0.707
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.925 0.693
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.916 0.693
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.916 0.693
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.916 0.693
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA07G19770.1 SBP 103 177
GLYMA07G19770.2 SBP 103 177

Links

Other SBP family TFs
Other Glycine max TFs

398 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_04135 Arthroderma benhamiae ARB_04135 N
MCYG_05409 Arthroderma otae MCYG_05409 N
fgenesh1_pm.00735_#_84 Aspergillus carbonarius fgenesh1_pm.00735_#_84 N
ACLA_096080 Aspergillus clavatus CADACLAG00009312 N
CADAFLAG00006166 Aspergillus flavus CADAFLAG00006166 N
AFUA_6G04400 Aspergillus fumigatus CADAFUAG00000706 N
CADANGAG00011775 Aspergillus niger CADANGAG00011775 N
CADAORAG00010470 Aspergillus oryzae CADAORAG00010470 N
EURHEDRAFT_549252 Aspergillus ruber EURHEDRAFT_549252 N
PVAR5_0014 Byssochlamys spectabilis PVAR5_0014 N
CIMG_02684 Coccidioides immitis CIMG_02684 N
CPC735_036830 Coccidioides posadasii CPC735_036830 N
MCYG_05409 Microsporum canis MCYG_05409 N
MGYG_06463 Microsporum gypseum MGYG_06463 N
NFIA_050940 Neosartorya fischeri CADNFIAG00005325 N
Pc20g12070 Penicillium chrysogenum Pc20g12070 N
PDIP_17810 Penicillium digitatum PDIP_17810 N
PEX1_068950 Penicillium expansum PEX1_068950 N
PITC_021450 Penicillium italicum PITC_021450 N
PMAA_011930 Penicillium marneffei PMAA_011930 N
PCH_Pc20g12070 Penicillium rubens PCH_Pc20g12070 N
U727_00431261141 Penicillium solitum U727_00431261141 N
PMAA_011930 Talaromyces marneffei PMAA_011930 N
TSTA_005160 Talaromyces stipitatus TSTA_005160 N
TEQG_07461 Trichophyton equinum TEQG_07461 N
H101_04594 Trichophyton interdigitale H101_04594 N
H102_01813 Trichophyton rubrum H102_01813 N
H105_01827 Trichophyton soudanense H105_01827 N
TESG_03808 Trichophyton tonsurans TESG_03808 N
TRV_07172 Trichophyton verrucosum TRV_07172 N