CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G067624
(
Zea mays
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
GRMZM2G067624
T322605_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G067624_P01
SBP
110
156
CQVERCSADMGVEKRYNRRHKVCDAHRKASVVLLAGLRQRFCQQCSR
GRMZM2G067624_P02
SBP
110
184
CQVERCSADMGVEKRYNRRHKVCDAHRKASVVLLAGLRQRFCQQCSRFHELSHFDDTKRSCRLRLAGHNERRRRN
Links
Other
SBP
family TFs
Other
Zea mays
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_02791
Aegilops tauschii
F775_02791
I
0.888
BRADI1G26720
Brachypodium distachyon
BRADI1G26720
I
0.923
Ciclev10019546m.g
Citrus clementina
Ciclev10019546m.g
I
0.902
orange1.1g008680m.g
Citrus sinensis
orange1.1g008680m.g
I
0.902
Cucsa.046310
Cucumis sativus
Cucsa.046310
N
0.894
MLOC_13032
Hordeum vulgare
MLOC_13032
I
0.914
MLOC_69667
Hordeum vulgare
MLOC_69667
I
0.888
GSMUA_Achr1G08440_001
Musa acuminata
GSMUA_Achr1G08440_001
I
0.919
GSMUA_Achr2G03070_001
Musa acuminata
GSMUA_Achr2G03070_001
I
0.929
Pavir.Bb02800
Panicum virgatum
Pavir.Bb02800
N
0.897
Si032170m.g
Setaria italica
Si032170m.g
I
0.911
Si031154m.g
Setaria italica
Si031154m.g
I
0.912
Solyc10g009080.2
Solanum lycopersicum
Solyc10g009080.2
I
0.888
Sb02g034180
Sorghum bicolor
Sb02g034180
N
0.965
Traes_2AL_B45245746
Triticum aestivum
Traes_2AL_B45245746
I
0.888
Traes_2AS_C2A4AFE6F
Triticum aestivum
Traes_2AS_C2A4AFE6F
I
0.893
Traes_2BL_69E6AB6D1
Triticum aestivum
Traes_2BL_69E6AB6D1
I
0.888
Traes_2BS_186EA570A
Triticum aestivum
Traes_2BS_186EA570A
I
0.914
TRIUR3_23102
Triticum urartu
TRIUR3_23102
I
0.914
GRMZM2G113779
Zea mays
GRMZM2G113779
N
0.962