GSMUA_Achr4G23650_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr4G23650_001 T322655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.898 0.800
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.888 0.720
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.888 0.720
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.888 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P23650_001 SBP 76 150

Links

Other SBP family TFs
Other Musa acuminata TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART10G04050 Oryza barthii OBART10G04050 N
OBART11G02970 Oryza barthii OBART11G02970 N
OGLUM10G03910 Oryza glumaepatula OGLUM10G03910 N
OGLUM11G02610 Oryza glumaepatula OGLUM11G02610 N
BGIOSGA036980 Oryza indica BGIOSGA036980 N
OLONG_027283 Oryza longistaminata OLONG_027283 N
OMERI11G02750 Oryza meridionalis OMERI11G02750 N
ONIVA05G14200 Oryza nivara ONIVA05G14200 I
ONIVA06G03680 Oryza nivara ONIVA06G03680 N
OPUNC11G02650 Oryza punctata OPUNC11G02650 N
ORUFI10G04240 Oryza rufipogon ORUFI10G04240 N
ORUFI11G02830 Oryza rufipogon ORUFI11G02830 N