CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.B00631
(
Eucalyptus grandis
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Eucgr.B00631
T323449_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.926
0.707
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.B00631.1
SBP
155
229
CQVYGCNKDLSSSKDYHKRHKVCEAHSKTSKVIVNGKEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKP
Links
Other
SBP
family TFs
Other
Eucalyptus grandis
TFs
310 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLEC006384
Cimex lectularius
CLEC006384
I
DAPPUDRAFT_52849
Daphnia pulex
DAPPUDRAFT_52849
I
Hsal_01917--NP_001011577.1_APIME
Harpegnathos saltator
Hsal_01917--NP_001011577.1_APIME
I
LCUP010246
Lucilia cuprina
LCUP010246
I
MDOA008285
Musca domestica
MDOA008285
I
tetur11g04270
Tetranychus urticae
tetur11g04270
I
L798_11048
Zootermopsis nevadensis
L798_11048
I