CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Genemark1.2708_g
(
Coccomyxa subellipsoidea C169
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Genemark1.2708_g
T323490_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
61925
SBP
147
221
PAVEDCTRDVCELSTYHFRYRICNVHIRLPAFMRQGKLQRFCQQCGRCHELSEFEGSQRSCRAQLDRHNARRRQA
Links
Other
SBP
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR10G12480
Leersia perrieri
LPERR10G12480
N
OMERI10G12830
Oryza meridionalis
OMERI10G12830
N
OPUNC10G14720
Oryza punctata
OPUNC10G14720
N
ORUFI10G17310
Oryza rufipogon
ORUFI10G17310
N
OS10G0523900
Oryza sativa
OS10G0523900
N
Si037714m.g
Setaria italica
Si037714m.g
N
Sb01g031140
Sorghum bicolor
Sb01g031140
N
GRMZM2G477287
Zea mays
GRMZM2G477287
N