CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM05G29230
(
Oryza glumaepatula
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
OGLUM05G29230
T323896_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM05G29230.1
Sigma 70
249
315
TTEWLVKYIAKTYAGMGTAFEDLLQAGKMGVLNGAEKFDSQKGCKFSTYVKYWIRKAMLALLAENSG
Links
Other
Sigma 70
family TFs
Other
Oryza glumaepatula
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL009212
Aedes aegypti
AAEL009212
I
ACUA012769
Anopheles culicifacies
ACUA012769
I
AFUN006040
Anopheles funestus
AFUN006040
I
AMAM018999
Anopheles maculatus
AMAM018999
I
lola
Drosophila melanogaster
FBgn0005630
D
GA30442
Drosophila pseudoobscura
FBgn0264579
I
LCUP002984
Lucilia cuprina
LCUP002984
I
MDOA000529
Musca domestica
MDOA000529
I
PPAI004731
Phlebotomus papatasi
PPAI004731
I