gene09615-v1.0-hybrid (Fragaria vesca)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 gene09615-v1.0-hybrid T324187_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna09615.1-v1.0-hybrid Sigma 70 291 361

Links

Other Sigma 70 family TFs
Other Fragaria vesca TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01539 Acanthocheilonema viteae nAv.1.0.1.g01539 N
ASU_12315 Ascaris suum ASU_12315 N
Bm4554 Brugia malayi Bm4554 N
BTMF_0000886001 Brugia timori BTMF_0000886001 N
nDi.2.2.2.g04767 Dirofilaria immitis nDi.2.2.2.g04767 N
EEL_0000313301 Elaeophora elaphi EEL_0000313301 N
GPUH_0000349001 Gongylonema pulchrum GPUH_0000349001 N
nLs.2.1.2.g00174 Litomosoides sigmodontis nLs.2.1.2.g00174 N
LOAG_15758 Loa loa LOAG_15758 N
OFLC_0001184401 Onchocerca flexuosa OFLC_0001184401 N
nOo.2.0.1.g12737 Onchocerca ochengi nOo.2.0.1.g12737 N
WBGene00239063 Onchocerca volvulus WBGene00239063 N
scaffold491-EXSNAP2012.2 Pristionchus exspectatus scaffold491-EXSNAP2012.2 N
PPA00214 Pristionchus pacificus PPA00214 N
L596_g18701 Steinernema carpocapsae L596_g18701 N
L893_g349 Steinernema glaseri L893_g349 N
L898_g6331 Steinernema monticolum L898_g6331 N
L892_g2112 Steinernema scapterisci L892_g2112 N
TCLT_0000041401 Thelazia callipaeda TCLT_0000041401 N
TCNE_0001731101 Toxocara canis TCNE_0001731101 N
WUBG_04546 Wuchereria bancrofti WUBG_04546 N