MDP0000235160 (Malus domestica)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 MDP0000235160 T324213_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000235160 Sigma 70 150 220

Links

Other Sigma 70 family TFs
Other Malus domestica TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003602 Aedes aegypti AAEL003602 N 0.000
Alligator_sinensis_CCG009248.1 Alligator sinensis Alligator_sinensis_CCG009248.1 N 0.000
PRDM8 Anolis carolinensis ENSACAG00000010106 N 0.000
AALB005765 Anopheles albimanus AALB005765 N 0.000
AARA007771 Anopheles arabiensis AARA007771 N 0.000
AATE006171 Anopheles atroparvus AATE006171 N 0.000
ACHR001790 Anopheles christyi ACHR001790 N 0.000
ACUA006984 Anopheles culicifacies ACUA006984 N 0.000
ADIR008055 Anopheles dirus ADIR008055 N 0.000
AEPI001699 Anopheles epiroticus AEPI001699 N 0.000
AFAF012484 Anopheles farauti AFAF012484 N 0.000
AFUN008026 Anopheles funestus AFUN008026 N 0.000
AGAP007109 Anopheles gambiae AGAP007109 N 0.000
AMAM024265 Anopheles maculatus AMAM024265 N 0.000
AMEC019433 Anopheles melas AMEC019433 N 0.000
AMEC009079 Anopheles melas AMEC009079 N 0.000
AMEM014597 Anopheles merus AMEM014597 N 0.000
AMIN011248 Anopheles minimus AMIN011248 N 0.000
AQUA002036 Anopheles quadriannulatus AQUA002036 N 0.000
ASIS021384 Anopheles sinensis ASIS021384 N 0.000
ASTEI06883 Anopheles stephensi ASTEI06883 N 0.000
ENSAMXG00000020060 Astyanax mexicanus ENSAMXG00000020060 N 0.000
BGIBMGA012741 Bombyx mori BGIBMGA012741 N 0.000
fgenesh2_pg.scaffold_282000018 Branchiostoma floridae fgenesh2_pg.scaffold_282000018 N 0.000
PRDM8 Callithrix jacchus ENSCJAG00000015064 N 0.000
PRDM8 Canis familiaris ENSCAFG00000008881 N 0.000
CapteG221467 Capitella teleta CapteG221467 N 0.000
PRDM8 Cavia porcellus ENSCPOG00000019738 N 0.000
ENSCSAG00000004478 Chlorocebus sabaeus ENSCSAG00000004478 N 0.000
CpipJ_CPIJ004963 Culex pipiens CpipJ_CPIJ004963 N 0.000
CPIJ004963 Culex quinquefasciatus CPIJ004963 N 0.000
KGM_11907 Danaus plexippus KGM_11907 N 0.000
prdm8b Danio rerio ENSDARG00000054683 N 0.000
PRDM8 Dasypus novemcinctus ENSDNOG00000011667 N 0.000
ENSECAG00000017767 Equus caballus ENSECAG00000017767 N 0.000
ENSFCAG00000026794 Felis catus ENSFCAG00000026794 N 0.000
ENSGMOG00000016370 Gadus morhua ENSGMOG00000016370 N 0.000
ENSGALG00000026560 Gallus gallus ENSGALG00000026560 N 0.000
PRDM8 Gorilla gorilla ENSGGOG00000007501 N 0.000
HMEL017852 Heliconius melpomene HMEL017852 N 0.000
PRDM8 Homo sapiens ENSG00000152784 N 0.000
ENSSTOG00000015688 Ictidomys tridecemlineatus ENSSTOG00000015688 N 0.000
ISCW009928 Ixodes scapularis ISCW009928 N 0.000
ENSLACG00000001866 Latimeria chalumnae ENSLACG00000001866 N 0.000
ENSLOCG00000007226 Lepisosteus oculatus ENSLOCG00000007226 N 0.000
LDEC001191 Leptinotarsa decemlineata LDEC001191 N 0.000
LotgiG69958 Lottia gigantea LotgiG69958 N 0.000
LCUP008185 Lucilia cuprina LCUP008185 N 0.000
ENSP00000406998 Macaca fascicularis ENSP00000406998 N 0.000
PRDM8 Macaca mulatta ENSMMUG00000003338 N 0.000
ENSMEUG00000015872 Macropus eugenii ENSMEUG00000015872 N 0.000
MCINX010301 Melitaea cinxia MCINX010301 N 0.000
PRDM8 Monodelphis domestica ENSMODG00000020789 N 0.000
MDOA007546 Musca domestica MDOA007546 N 0.000
ENSMPUG00000006558 Mustela putorius furo ENSMPUG00000006558 N 0.000
Prdm8 Mus musculus ENSMUSG00000035456 N 0.000
PRDM8 Myotis lucifugus ENSMLUG00000030190 N 0.000
ENSNLEG00000008504 Nomascus leucogenys ENSNLEG00000008504 N 0.000
Ocbimv22006527m.g Octopus bimaculoides Ocbimv22006527m.g N 0.000
Ogr08710 Ophisaurus gracilis Ogr08710 N 0.000
ENSONIG00000014038 Oreochromis niloticus ENSONIG00000014038 N 0.000
prdm8b Oryzias latipes ENSORLG00000017786 N 0.000
ENSOARG00000018972 Ovis aries ENSOARG00000018972 N 0.000
ENSPANG00000024349 Papio anubis ENSPANG00000024349 N 0.000
PHUM271650 Pediculus humanus PHUM271650 N 0.000
ENSPMAG00000005756 Petromyzon marinus ENSPMAG00000005756 N 0.000
PPAI006396 Phlebotomus papatasi PPAI006396 N 0.000
ENSPFOG00000011716 Poecilia formosa ENSPFOG00000011716 N 0.000
Pvit_15291 Pogona vitticeps Pvit_15291 N 0.000
ENSPPYG00000014879 Pongo abelii ENSPPYG00000014879 N 0.000
PRDM8 Procavia capensis ENSPCAG00000001081 N 0.000
Prdm8 Rattus norvegicus ENSRNOG00000002004 N 0.000
Sakowv30017448m.g Saccoglossus kowalevskii Sakowv30017448m.g N 0.000
ENSSHAG00000018147 Sarcophilus harrisii ENSSHAG00000018147 N 0.000
SMU15028407 Schmidtea mediterranea SMU15028407 N 0.000
PRDM8 Sorex araneus ENSSARG00000009823 N 0.000
SMAR006435 Strigamia maritima SMAR006435 N 0.000
prdm8b Takifugu rubripes ENSTRUG00000001003 N 0.000
tetur11g03890 Tetranychus urticae tetur11g03890 N 0.000
prdm8b Tetraodon nigroviridis ENSTNIG00000016712 N 0.000
TC013073 Tribolium castaneum TC013073 N 0.000
PRDM8 Tupaia belangeri ENSTBEG00000006138 N 0.000
prdm8 Xenopus tropicalis XB-GENE-984391 N 0.000
ENSXMAG00000009993 Xiphophorus maculatus ENSXMAG00000009993 N 0.000
L798_05037 Zootermopsis nevadensis L798_05037 N 0.000