ENSGMOG00000019827 (Gadus morhua)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSGMOG00000019827 T324673_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFIA
M03480_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIA_1 		0.956 0.956
NFIA
M03481_2.00 		Homo sapiens
NNTGCCAANN
NNTTGGCANN		 SELEX
Jolma et al.(2013)
NFIA_2 		0.956 0.956
NFIA
M09379_2.00 		Homo sapiens
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C 		0.956 0.956
Nfia
M09383_2.00 		Mus musculus
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C 		0.956 0.956
NFIA
M11282_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1A_Q6_01 		0.956 0.956
Nfia
M11291_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFIA_02 		0.956 0.956
NFIB
M03479_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIB_1 		0.945 0.945
NFIB
M05747_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIB_FL_HT-SELEX 		0.945 0.945
Nfib
M09381_2.00 		Mus musculus
BVWGCCARV
BYTGGCWBV		 Misc
Kulakovskiy et al.(2013)
NFIB_MOUSE.H11MO.0.C 		0.945 0.945
NFIB
M11280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6_01 		0.945 0.945
NFIB
M11281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6 		0.945 0.945
NFIB
M05748_2.00 		Homo sapiens
NTTGGCDNNNTGCCARN
NYTGGCANNNHGCCAAN		 SELEX
Yin et al.(2017)
NFIB_FL_Methyl-HT-SELEX 		0.945 0.945
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.912 0.912
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.912 0.912
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.912 0.912
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.912 0.912
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.912 0.912
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.912 0.912
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.846 0.846
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.835 0.835
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.835 0.835
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.835 0.835
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.835 0.835
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.835 0.835
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.835 0.835
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.835 0.835
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.835 0.835
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000021314 SMAD 65 169

Links

Other SMAD family TFs
Other Gadus morhua TFs

344 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008190 Aedes aegypti AAEL008190 N
AALB000200 Anopheles albimanus AALB000200 I
AARA003793 Anopheles arabiensis AARA003793 I
AATE012724 Anopheles atroparvus AATE012724 I
ACHR008323 Anopheles christyi ACHR008323 I
ACOM029390 Anopheles coluzzii ACOM029390 I
ACUA027275 Anopheles culicifacies ACUA027275 I
ADIR009414 Anopheles dirus ADIR009414 I
AEPI007123 Anopheles epiroticus AEPI007123 I
AFAF019729 Anopheles farauti AFAF019729 I
AFUN010726 Anopheles funestus AFUN010726 I
AGAP009983 Anopheles gambiae AGAP009983 I
AMAM007264 Anopheles maculatus AMAM007264 I
AMEC011376 Anopheles melas AMEC011376 I
AMEM008272 Anopheles merus AMEM008272 I
AMIN006744 Anopheles minimus AMIN006744 I
AQUA009094 Anopheles quadriannulatus AQUA009094 I
ASIS002214 Anopheles sinensis ASIS002214 I
ASTEI03995 Anopheles stephensi ASTEI03995 I
GB46156 Apis mellifera GB46156 N
ACEP23825 Atta cephalotes ACEP23825 I
BGIBMGA009116 Bombyx mori BGIBMGA009116 I
Cflo_08671--XP_001121050.1_APIME Camponotus floridanus Cflo_08671--XP_001121050.1_APIME I
CLEC001934 Cimex lectularius CLEC001934 I
CpipJ_CPIJ003113 Culex pipiens CpipJ_CPIJ003113 I
KGM_16315 Danaus plexippus KGM_16315 N
YQE_06569 Dendroctonus ponderosae YQE_06569 N
GF14859 Drosophila ananassae FBgn0091886 I
GG24687 Drosophila erecta FBgn0116818 I
GH10058 Drosophila grimshawi FBgn0117539 I
net Drosophila melanogaster FBgn0002931 D
GI16429 Drosophila mojavensis FBgn0139177 I
GL13900 Drosophila persimilis FBgn0151505 I
GA11011 Drosophila pseudoobscura FBgn0071067 I
GM16704 Drosophila sechellia FBgn0171617 I
GD22993 Drosophila simulans FBgn0194385 I
GJ16214 Drosophila virilis FBgn0203399 I
GK21091 Drosophila willistoni FBgn0223083 I
GE16494 Drosophila yakuba FBgn0234011 I
HHAL005211-PA Halyomorpha halys HHAL005211-PA I
Hsal_05296--XP_001121050.1_APIME Harpegnathos saltator Hsal_05296--XP_001121050.1_APIME N
HMEL016722 Heliconius melpomene HMEL016722 N
ISCW011969 Ixodes scapularis ISCW011969 N
LDEC018964 Leptinotarsa decemlineata LDEC018964 N
MCINX005941 Melitaea cinxia MCINX005941 N
PHUM129210 Pediculus humanus PHUM129210 I
PPAI008042 Phlebotomus papatasi PPAI008042 N
SINV15468 Solenopsis invicta SINV15468 I
TC005579 Tribolium castaneum TC005579 N
L798_06974 Zootermopsis nevadensis L798_06974 I