CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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sma-3
(
Caenorhabditis elegans
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
WBGene00004857
T325232_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
R13F6.9
SMAD
28
134
CEKAVEALVKKLKKKNNGCGTLEDLECVLANPCTNSRCITIAKSLDGRLQVSHKKGLPHVIYCRVWRWPDISSPHELRSIDTCSYPYESSSKTMYICINPYHYQRLS
Links
Other
SMAD
family TFs
Other
Caenorhabditis elegans
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_05759
Ancylostoma caninum
ANCCAN_05759
N
0.706
ANCCEY_08342
Ancylostoma ceylanicum
ANCCEY_08342
N
0.706
ACAC_0000906701
Angiostrongylus cantonensis
ACAC_0000906701
N
0.706
CBN04759
Caenorhabditis brenneri
CBN04759
N
0.951
CBG16541
Caenorhabditis briggsae
CBG16541
N
0.922
CJA17204
Caenorhabditis japonica
CJA17204
N
0.912
CRE25068
Caenorhabditis remanei
CRE25068
N
0.931
DICVIV_05604
Dictyocaulus viviparus
DICVIV_05604
N
0.716
HCOI01110700
Haemonchus contortus
HCOI01110700
N
0.706
HPLM_0000851001
Haemonchus placei
HPLM_0000851001
N
0.706
HPBE_0001627301
Heligmosomoides bakeri
HPBE_0001627301
N
0.706
NECAME_03891
Necator americanus
NECAME_03891
N
0.706
scaffold778-EXSNAP2012.5
Pristionchus exspectatus
scaffold778-EXSNAP2012.5
N
0.725
SVUK_0001208601
Strongylus vulgaris
SVUK_0001208601
N
0.706
SMUV_0000762601
Syphacia muris
SMUV_0000762601
I
0.706
TELCIR_10810
Teladorsagia circumcincta
TELCIR_10810
N
0.706