CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_12049
(
Rhizopus oryzae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RO3G_12049
T326112_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_12048
Sox
46
114
PKRNLSSYMLYTQAVRPKVVAEHPDMKAIEIAKFVGEMWNKLSEKEKMPYVKQAQKEKVRFEKENASYK
Links
Other
Sox
family TFs
Other
Rhizopus oryzae
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.416
gw1.4.435.1
Cryphonectria parasitica
gw1.4.435.1
I
0.423
ETH_00027140
Eimeria tenella
ETH_00027140
I
0.426
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.418
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.418
estExt_fgeneshMC_pm.C_110016
Mucor circinelloides
estExt_fgeneshMC_pm.C_110016
N
0.486
RO3G_05645
Rhizopus oryzae
RO3G_05645
N
0.709