AMTR_s00093p00057150 (Amborella trichopoda)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AMTR_s00093p00057150 T326433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM98786 Sox 146 211
ERM98786 Sox 262 328
ERM98786 Sox 389 456

Links

Other Sox family TFs
Other Amborella trichopoda TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG014285.1 Alligator sinensis Alligator_sinensis_CCG014285.1 N
ENSAPLG00000014035 Anas platyrhynchos ENSAPLG00000014035 N
BGLB002717 Biomphalaria glabrata BGLB002717 N
estExt_fgenesh2_pg.C_1230031 Branchiostoma floridae estExt_fgenesh2_pg.C_1230031 N
Brh_R012356 Buceros rhinoceros Brh_R012356 N
Aan_R003320 Calypte anna Aan_R003320 N
CapteG161824 Capitella teleta CapteG161824 N
CGI_10026935 Crassostrea gigas CGI_10026935 N
ENSGALG00000000983 Gallus gallus ENSGALG00000000983 N
ENSLACG00000003590 Latimeria chalumnae ENSLACG00000003590 N
L3MBTL1 Meleagris gallopavo ENSMGAG00000000827 N
Sakowv30043999m.g Saccoglossus kowalevskii Sakowv30043999m.g N
SPU_021123 Strongylocentrotus purpuratus SPU_021123 N