Bo5g009010 (Brassica oleracea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Bo5g009010 T326656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.741 0.955
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.707 0.932
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.707 0.932
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.660 0.705
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.660 0.705
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.596 0.750
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g009010.1 Sox 116 159

Links

Other Sox family TFs
Other Brassica oleracea TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB10302.1 Alternaria brassicicola AB10302.1 I
AGOS_AER071W Ashbya gossypii AGOS_AER071W I
fgenesh1_pm.00042_#_268 Aspergillus carbonarius fgenesh1_pm.00042_#_268 I
ACLA_020620 Aspergillus clavatus CADACLAG00002717 I
CADAFLAG00002691 Aspergillus flavus CADAFLAG00002691 I
AFUA_1G14750 Aspergillus fumigatus CADAFUAG00006891 I
ANIA_00817 Aspergillus nidulans CADANIAG00001843 I
CADANGAG00001277 Aspergillus niger CADANGAG00001277 I
CADAORAG00001127 Aspergillus oryzae CADAORAG00001127 I
EURHEDRAFT_512336 Aspergillus ruber EURHEDRAFT_512336 I
ATEG_00691 Aspergillus terreus CADATEAG00005769 I
M437DRAFT_61697 Aureobasidium melanogenum M437DRAFT_61697 I
M438DRAFT_147774 Aureobasidium pullulans M438DRAFT_147774 I
AUEXF2481DRAFT_311834 Aureobasidium subglaciale AUEXF2481DRAFT_311834 I
BAUCODRAFT_120448 Baudoinia compniacensis BAUCODRAFT_120448 I
BBA_01441 Beauveria bassiana BBA_01441 I
COCC4DRAFT_141470 Bipolaris maydis COCC4DRAFT_141470 I
COCMIDRAFT_8853 Bipolaris oryzae COCMIDRAFT_8853 I
COCSADRAFT_185038 Bipolaris sorokiniana COCSADRAFT_185038 I
COCVIDRAFT_42340 Bipolaris victoriae COCVIDRAFT_42340 I
COCCADRAFT_35826 Bipolaris zeicola COCCADRAFT_35826 I
BDDG_09794 Blastomyces dermatitidis BDDG_09794 I
AWRI1499_3112 Brettanomyces bruxellensis AWRI1499_3112 I
PVAR5_1442 Byssochlamys spectabilis PVAR5_1442 I
CaO19.13374 Candida albicans CaO19.13374 I
CaO19.5953 Candida albicans CaO19.5953 I
CD36_84830 Candida dubliniensis CD36_84830 I
CAGL0D00682g Candida glabrata CAGL0D00682g I
CAGL0M09955g Candida glabrata CAGL0M09955g I
PGUG_02203 Candida guilliermondii PGUG_02203 I
CLUG_05237 Candida lusitaniae CLUG_05237 I
G210_2438 Candida maltosa G210_2438 I
CORT_0C01760 Candida orthopsilosis CORT_0C01760 I
CPAG_02863 Candida parapsilosis CPAG_02863 I
CANTEDRAFT_136954 Candida tenuis CANTEDRAFT_136954 I
CTRG_02503 Candida tropicalis CTRG_02503 I
A1O1_07090 Capronia coronata A1O1_07090 I
A1O3_04264 Capronia epimyces A1O3_04264 I
PV04_02740 Capronia semiimmersa PV04_02740 N
CHGG_01658 Chaetomium globosum CHGG_01658 I
CTHT_0058170 Chaetomium thermophilum CTHT_0058170 N
Z519_09367 Cladophialophora bantiana Z519_09367 N
G647_05804 Cladophialophora carrionii G647_05804 N
PV07_01574 Cladophialophora immunda PV07_01574 N
A1O5_08144 Cladophialophora psammophila A1O5_08144 N
A1O7_02576 Cladophialophora yegresii A1O7_02576 N
CLUG_05237 Clavispora lusitaniae CLUG_05237 I
CIMG_03255 Coccidioides immitis CIMG_03255 I
CPC735_009250 Coccidioides posadasii CPC735_009250 I
estExt_fgenesh1_pg.C_170193 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_170193 I
W97_08713 Coniosporium apollinis W97_08713 I
CCM_05399 Cordyceps militaris CCM_05399 I
HMPREF1541_07180 Cyphellophora europaea HMPREF1541_07180 N
DEHA2D11748g Debaryomyces hansenii DEHA2D11748g I
DOTSEDRAFT_51823 Dothistroma septosporum DOTSEDRAFT_51823 I
EPUS_02373 Endocarpon pusillum EPUS_02373 N
Ecym_3253 Eremothecium cymbalariae Ecym_3253 I
A1O9_07866 Exophiala aquamarina A1O9_07866 N
HMPREF1120_04491 Exophiala dermatitidis HMPREF1120_04491 I
PV10_03433 Exophiala mesophila PV10_03433 N
PV06_07675 Exophiala oligosperma PV06_07675 I
PV11_04834 Exophiala sideris PV11_04834 N
PV08_03512 Exophiala spinifera PV08_03512 N
PV05_07500 Exophiala xenobiotica PV05_07500 N
Z517_04487 Fonsecaea pedrosoi Z517_04487 N
GGTG_10100 Gaeumannomyces graminis GGTG_10100 I
M7I_6817 Glarea lozoyensis M7I_6817 I
CMQ_3345 Grosmannia clavigera CMQ_3345 N
HCBG_01463 Histoplasma capsulatum HCBG_01463 I
KAFR_0A05850 Kazachstania africana KAFR_0A05850 I
KNAG_0B06200 Kazachstania naganishii KNAG_0B06200 I
KLTH0D14718g Kluyveromyces thermotolerans KLTH0D14718g I
Kwal_4156 Kluyveromyces waltii Kwal_4156 I
PAS_chr4_0169 Komagataella pastoris PAS_chr4_0169 I
KUCA_T00000649001 Kuraishia capsulata KUCA_T00000649001 I
LALA0_S03e06964g Lachancea lanzarotensis LALA0_S03e06964g I
KLTH0D14718g Lachancea thermotolerans KLTH0D14718g I
LEMA_P092020.1 Leptosphaeria maculans LEMA_P092020.1 I
LELG_02885 Lodderomyces elongisporus LELG_02885 I
MPH_04552 Macrophomina phaseolina MPH_04552 I
MBM_03501 Marssonina brunnea MBM_03501 N
MAM_05286 Metarhizium album MAM_05286 I
X797_004862 Metarhizium robertsii X797_004862 I
PGUG_02203 Meyerozyma guilliermondii PGUG_02203 I
MCYG_06487 Microsporum canis MCYG_06487 I
MGYG_06954 Microsporum gypseum MGYG_06954 I
GNLVRS01_PISO0K03222g Millerozyma farinosa GNLVRS01_PISO0K03222g I
GNLVRS01_PISO0L03223g Millerozyma farinosa GNLVRS01_PISO0L03223g I
estExt_fgenesh1_pg.C_90338 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_90338 I
estExt_fgenesh1_pm.C_chr_10304 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_10304 I
NCAS_0A02570 Naumovozyma castellii NCAS_0A02570 I
NCAS_0J01590 Naumovozyma castellii NCAS_0J01590 I
NDAI_0D04320 Naumovozyma dairenensis NDAI_0D04320 I
NDAI_0J02360 Naumovozyma dairenensis NDAI_0J02360 I
UCRNP2_3551 Neofusicoccum parvum UCRNP2_3551 I
NFIA_010650 Neosartorya fischeri CADNFIAG00001974 I
NCU02621 Neurospora crassa NCU02621 N
estExt_fgenesh3_pm.C_20637 Neurospora discreta estExt_fgenesh3_pm.C_20637 N
NEUTE1DRAFT_126435 Neurospora tetrasperma NEUTE1DRAFT_126435 N
HPODL_00600 Ogataea parapolymorpha HPODL_00600 I
OIDMADRAFT_149888 Oidiodendron maius OIDMADRAFT_149888 I
F503_05202 Ophiostoma piceae uamh F503_05202 N
PABG_05941 Paracoccidioides brasiliensis PABG_05941 I
PAAG_05441 Paracoccidioides sp lutzii PAAG_05441 I
Pc16g13790 Penicillium chrysogenum Pc16g13790 I
PDIP_66170 Penicillium digitatum PDIP_66170 I
PEX1_093760 Penicillium expansum PEX1_093760 I
PITC_047260 Penicillium italicum PITC_047260 I
PMAA_073990 Penicillium marneffei PMAA_073990 I
PDE_00574 Penicillium oxalicum PDE_00574 I
PCH_Pc16g13790 Penicillium rubens PCH_Pc16g13790 I
U727_00432192271 Penicillium solitum U727_00432192271 I
SNOG_11501 Phaeosphaeria nodorum SNOG_11501 I
JL09_g4045 Pichia kudriavzevii JL09_g4045 I
XP_002493573.1 Pichia pastoris XP_002493573.1 I
estExt_gwp_genewisePlus_worm.C_chr_1.20975 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_1.20975 I
PODANS_1_4460 Podospora anserina PODANS_1_4460 I
MYCFIDRAFT_215154 Pseudocercospora fijiensis MYCFIDRAFT_215154 I
GMDG_00559 Pseudogymnoascus destructans GMDG_00559 N
V499_02445 Pseudogymnoascus pannorum V499_02445 N
PTT_09059 Pyrenophora teres PTT_09059 I
PTRG_04689 Pyrenophora triticirepentis PTRG_04689 I
Z518_02572 Rhinocladiella mackenziei Z518_02572 N
SU7_2383 Saccharomyces arboricola SU7_2383 I
17461_YLR403W Saccharomyces bayanus 17461_YLR403W I
Scas_Contig719.24 Saccharomyces castellii Scas_Contig719.24 I
SFP1 Saccharomyces cerevisiae YLR403W D
SKUD_206617 Saccharomyces kudriavzevii SKUD_206617 I
15714_YLR403W Saccharomyces mikatae 15714_YLR403W I
15331_YLR403W Saccharomyces paradoxus 15331_YLR403W I
AACERI_AaceriAER071W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER071W I
SAPIO_CDS1423 Scedosporium apiospermum SAPIO_CDS1423 I
PICST_81274 Scheffersomyces stipitis PICST_81274 I
SPOG_00344 Schizosaccharomyces cryophilus SPOG_00344 I
SJAG_03241 Schizosaccharomyces japonicus SJAG_03241 I
SOCG_04198 Schizosaccharomyces octosporus SOCG_04198 I
sfp1 Schizosaccharomyces pombe SPAC16.05c I
SBOR_0866 Sclerotinia borealis SBOR_0866 N
SS1G_05845 Sclerotinia sclerotiorum SS1G_05845 N
SETTUDRAFT_87041 Setosphaeria turcica SETTUDRAFT_87041 I
SPAPADRAFT_62197 Spathaspora passalidarum SPAPADRAFT_62197 I
HMPREF1624_03059 Sporothrix schenckii HMPREF1624_03059 N
S40288_02803 Stachybotrys chartarum S40288_02803 I
S40285_08847 Stachybotrys chlorohalonata S40285_08847 I
SNOG_11500 Stagonospora nodorum SNOG_11500 I
PMAA_073990 Talaromyces marneffei PMAA_073990 I
TBLA_0I03040 Tetrapisispora blattae TBLA_0I03040 I
TPHA_0B00710 Tetrapisispora phaffii TPHA_0B00710 I
TPHA_0B02140 Tetrapisispora phaffii TPHA_0B02140 I
THITE_2121456 Thielavia terrestris THITE_2121456 N
VHEMI04961 Torrubiella hemipterigena VHEMI04961 I
TRIATDRAFT_140885 Trichoderma atroviride TRIATDRAFT_140885 I
TRIREDRAFT_122680 Trichoderma reesei TRIREDRAFT_122680 I
TRIVIDRAFT_208206 Trichoderma virens TRIVIDRAFT_208206 I
TEQG_05013 Trichophyton equinum TEQG_05013 I
H101_05070 Trichophyton interdigitale H101_05070 I
TESG_04731 Trichophyton tonsurans TESG_04731 I
TRV_02130 Trichophyton verrucosum TRV_02130 I
UREG_07103 Uncinocarpus reesii UREG_07103 I
UV8b_2245 Ustilaginoidea virens UV8b_2245 I
Kpol_1002p4 Vanderwaltozyma polyspora Kpol_1002p4 I
Kpol_1055p71 Vanderwaltozyma polyspora Kpol_1055p71 I
BN7_5712 Wickerhamomyces ciferrii BN7_5712 I
YALI0_F11487g Yarrowia lipolytica YALI0_F11487g I
ZBAI_02717 Zygosaccharomyces bailii ZBAI_02717 I
ZBAI_08964 Zygosaccharomyces bailii ZBAI_08964 I
ZYRO0B12738g Zygosaccharomyces rouxii ZYRO0B12738g I
Mycgr3G98356 Zymoseptoria tritici Mycgr3G98356 I