CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG17468
(
Caenorhabditis briggsae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBG17468
T326872_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG17468
Sox
50
118
GKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVAAYG
CBG17468
Sox
136
204
PKRALSAFFFYSQDKRPEIQGQHPDWKVGQVAQELGKMWKLVPQETKDAYETKAQADKDRYAEEMRHYK
Links
Other
Sox
family TFs
Other
Caenorhabditis briggsae
TFs
153 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_024160
Acremonium chrysogenum
ACRE_024160
I
AB09304.1
Alternaria brassicicola
AB09304.1
I
AOL_s00043g47
Arthrobotrys oligospora
AOL_s00043g47
N
AGOS_AFL085C
Ashbya gossypii
AGOS_AFL085C
I
AGOS_AFR136C
Ashbya gossypii
AGOS_AFR136C
I
CADAFLAG00013433
Aspergillus flavus
CADAFLAG00013433
N
AFUA_4G04502
Aspergillus fumigatus
CADAFUAG00001430
N
CADANGAG00010969
Aspergillus niger
CADANGAG00010969
N
EURHEDRAFT_462177
Aspergillus ruber
EURHEDRAFT_462177
N
M437DRAFT_56721
Aureobasidium melanogenum
M437DRAFT_56721
N
M438DRAFT_272047
Aureobasidium pullulans
M438DRAFT_272047
N
AUEXF2481DRAFT_4075
Aureobasidium subglaciale
AUEXF2481DRAFT_4075
N
BBA_04597
Beauveria bassiana
BBA_04597
I
COCC4DRAFT_83005
Bipolaris maydis
COCC4DRAFT_83005
I
COCMIDRAFT_99053
Bipolaris oryzae
COCMIDRAFT_99053
I
COCSADRAFT_293960
Bipolaris sorokiniana
COCSADRAFT_293960
I
COCVIDRAFT_105959
Bipolaris victoriae
COCVIDRAFT_105959
I
COCCADRAFT_105318
Bipolaris zeicola
COCCADRAFT_105318
I
BOTBODRAFT_110728
Botryobasidium botryosum
BOTBODRAFT_110728
I
Bcin02g02960
Botrytis cinerea
Bcin02g02960
N
CaO19.11452
Candida albicans
CaO19.11452
N
CaO19.3969
Candida albicans
CaO19.3969
N
CaO19.454
Candida albicans
CaO19.454
I
CaO19.8085
Candida albicans
CaO19.8085
I
CD36_31370
Candida dubliniensis
CD36_31370
N
CD36_54430
Candida dubliniensis
CD36_54430
N
CAGL0I07183g
Candida glabrata
CAGL0I07183g
I
PGUG_03027
Candida guilliermondii
PGUG_03027
N
PGUG_04779
Candida guilliermondii
PGUG_04779
I
CLUG_03610
Candida lusitaniae
CLUG_03610
I
G210_0510
Candida maltosa
G210_0510
I
G210_1597
Candida maltosa
G210_1597
N
CORT_0D05240
Candida orthopsilosis
CORT_0D05240
I
CORT_0F01150
Candida orthopsilosis
CORT_0F01150
N
CPAG_02000
Candida parapsilosis
CPAG_02000
N
CPAG_04153
Candida parapsilosis
CPAG_04153
N
CANTEDRAFT_132848
Candida tenuis
CANTEDRAFT_132848
I
CTRG_00655
Candida tropicalis
CTRG_00655
I
CTRG_06093
Candida tropicalis
CTRG_06093
I
A1O1_04043
Capronia coronata
A1O1_04043
N
A1O3_01459
Capronia epimyces
A1O3_01459
N
PV04_05986
Capronia semiimmersa
PV04_05986
N
Z519_07578
Cladophialophora bantiana
Z519_07578
N
G647_06910
Cladophialophora carrionii
G647_06910
I
PV07_04143
Cladophialophora immunda
PV07_04143
N
A1O5_07765
Cladophialophora psammophila
A1O5_07765
N
A1O7_05617
Cladophialophora yegresii
A1O7_05617
N
CLUG_03610
Clavispora lusitaniae
CLUG_03610
I
CFIO01_04547
Colletotrichum fioriniae
CFIO01_04547
N
CGGC5_1651
Colletotrichum gloeosporioides
CGGC5_1651
N
GLRG_05271
Colletotrichum graminicola
GLRG_05271
N
Cob_03924
Colletotrichum orbiculare
Cob_03924
N
CSUB01_10826
Colletotrichum sublineola
CSUB01_10826
N
CCM_05142
Cordyceps militaris
CCM_05142
I
L804_06549
Cryptococcus gattii
L804_06549
I
CNB00120
Cryptococcus neoformans
CNB00120
I
HMPREF1541_00864
Cyphellophora europaea
HMPREF1541_00864
N
H072_3239
Dactylellina haptotyla
H072_3239
N
DEHA2G10560g
Debaryomyces hansenii
DEHA2G10560g
I
DRE_06964
Drechslerella stenobrocha
DRE_06964
I
Ecym_2312
Eremothecium cymbalariae
Ecym_2312
I
HMPREF1120_08552
Exophiala dermatitidis
HMPREF1120_08552
N
PV10_07698
Exophiala mesophila
PV10_07698
N
PV06_00857
Exophiala oligosperma
PV06_00857
N
PV08_00880
Exophiala spinifera
PV08_00880
N
PV05_05603
Exophiala xenobiotica
PV05_05603
N
FIBRA_02011
Fibroporia radiculosa
FIBRA_02011
I
Z517_00530
Fonsecaea pedrosoi
Z517_00530
N
GGTG_10719
Gaeumannomyces graminis
GGTG_10719
N
CMQ_3588
Grosmannia clavigera
CMQ_3588
N
gw1.2.1743.1
Heterobasidion annosum
gw1.2.1743.1
I
HETIRDRAFT_242938
Heterobasidion irregulare
HETIRDRAFT_242938
I
KNAG_0B04040
Kazachstania naganishii
KNAG_0B04040
I
KLLA0_D03322g
Kluyveromyces lactis
KLLA0_D03322g
I
KLLA0_E03191g
Kluyveromyces lactis
KLLA0_E03191g
I
Kwal_21254
Kluyveromyces waltii
Kwal_21254
I
Kwal_24036
Kluyveromyces waltii
Kwal_24036
I
PAS_chr3_0115
Komagataella pastoris
PAS_chr3_0115
I
KUCA_T00005449001
Kuraishia capsulata
KUCA_T00005449001
I
KUCA_T00005514001
Kuraishia capsulata
KUCA_T00005514001
N
SAKL0A04576g
Lachancea kluyveri
SAKL0A04576g
I
SAKL0G03586g
Lachancea kluyveri
SAKL0G03586g
I
LALA0_S01e07668g
Lachancea lanzarotensis
LALA0_S01e07668g
I
KLTH0F14982g
Lachancea thermotolerans
KLTH0F14982g
I
LEMA_P023210.1
Leptosphaeria maculans
LEMA_P023210.1
I
LELG_04038
Lodderomyces elongisporus
LELG_04038
N
MGG_06971
Magnaporthe oryzae
MGG_06971
N
MAPG_00013
Magnaporthe poae
MAPG_00013
N
EDP41992.1
Malassezia globosa
EDP41992.1
I
MANI_027126
Metarhizium anisopliae
MANI_027126
N
MBR_04590
Metarhizium brunneum
MBR_04590
N
MGU_04157
Metarhizium guizhouense
MGU_04157
N
MAJ_01594
Metarhizium majus
MAJ_01594
N
X797_007282
Metarhizium robertsii
X797_007282
N
PGUG_03027
Meyerozyma guilliermondii
PGUG_03027
N
PGUG_04779
Meyerozyma guilliermondii
PGUG_04779
I
GNLVRS01_PISO0A02134g
Millerozyma farinosa
GNLVRS01_PISO0A02134g
N
GNLVRS01_PISO0B02289g
Millerozyma farinosa
GNLVRS01_PISO0B02289g
N
GNLVRS01_PISO0E07748g
Millerozyma farinosa
GNLVRS01_PISO0E07748g
I
GNLVRS01_PISO0F09091g
Millerozyma farinosa
GNLVRS01_PISO0F09091g
I
MYCTH_2312138
Myceliophthora thermophila
MYCTH_2312138
N
NCAS_0E03870
Naumovozyma castellii
NCAS_0E03870
I
NCAS_0H02280
Naumovozyma castellii
NCAS_0H02280
I
NDAI_0C01380
Naumovozyma dairenensis
NDAI_0C01380
I
NFIA_028860
Neosartorya fischeri
CADNFIAG00002767
N
hsf-2
Neurospora crassa
NCU08480
N
estExt_fgenesh2_pg.C_100130
Neurospora discreta
estExt_fgenesh2_pg.C_100130
N
HPODL_00954
Ogataea parapolymorpha
HPODL_00954
I
F503_06440
Ophiostoma piceae uamh
F503_06440
N
Pc13g06670
Penicillium chrysogenum
Pc13g06670
N
PDIP_15740
Penicillium digitatum
PDIP_15740
N
PEX1_020890
Penicillium expansum
PEX1_020890
N
PMAA_085950
Penicillium marneffei
PMAA_085950
N
PCH_Pc13g06670
Penicillium rubens
PCH_Pc13g06670
N
U727_0043017041
Penicillium solitum
U727_0043017041
N
PFICI_09422
Pestalotiopsis fici
PFICI_09422
I
SNOG_08309
Phaeosphaeria nodorum
SNOG_08309
I
SNOG_09038
Phaeosphaeria nodorum
SNOG_09038
I
JL09_g3802
Pichia kudriavzevii
JL09_g3802
N
JL09_g4519
Pichia kudriavzevii
JL09_g4519
I
XP_002492324.1
Pichia pastoris
XP_002492324.1
I
estExt_fgenesh1_pg.C_chr_6.10474
Pichia stipitis
estExt_fgenesh1_pg.C_chr_6.10474
I
PredSwiss_ASS2010_3259.1
Pneumocystis carinii
PredSwiss_ASS2010_3259.1
I
PredSwiss_CON2839.2
Pneumocystis carinii
PredSwiss_CON2839.2
I
PredSwiss_EST948.1
Pneumocystis carinii
PredSwiss_EST948.1
I
GMDG_04555
Pseudogymnoascus destructans
GMDG_04555
I
V499_02686
Pseudogymnoascus pannorum
V499_02686
I
PSEUBRA_SCAF6g00904
Pseudozyma brasiliensis
PSEUBRA_SCAF6g00904
I
PFL1_06413
Pseudozyma flocculosa
PFL1_06413
I
PHSY_005227
Pseudozyma hubeiensis
PHSY_005227
I
PTT_16950
Pyrenophora teres
PTT_16950
I
PTRG_00596
Pyrenophora triticirepentis
PTRG_00596
I
Z518_08730
Rhinocladiella mackenziei
Z518_08730
N
RO3G_10499
Rhizopus oryzae
RO3G_10499
I
RHTO_01429
Rhodosporidium toruloides
RHTO_01429
I
RTG_02995
Rhodotorula glutinis
RTG_02995
I
23912_Multiple
Saccharomyces bayanus
23912_Multiple
I
Scas_Contig645.15
Saccharomyces castellii
Scas_Contig645.15
I
Scas_Contig714.29
Saccharomyces castellii
Scas_Contig714.29
I
SFL1
Saccharomyces cerevisiae
YOR140W
D
SKUD_183302
Saccharomyces kudriavzevii
SKUD_183302
I
20155_YOR140W
Saccharomyces mikatae
20155_YOR140W
I
20850_YOR140W
Saccharomyces paradoxus
20850_YOR140W
I
AACERI_AaceriAFL085C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL085C
I
AACERI_AaceriAFR136C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR136C
I
SAPIO_CDS6676
Scedosporium apiospermum
SAPIO_CDS6676
I
PICST_66881
Scheffersomyces stipitis
PICST_66881
N
PICST_68146
Scheffersomyces stipitis
PICST_68146
I
SCLCIDRAFT_1218516
Scleroderma citrinum
SCLCIDRAFT_1218516
I
SETTUDRAFT_26712
Setosphaeria turcica
SETTUDRAFT_26712
I
SMAC_00003
Sordaria macrospora
SMAC_00003
N
SPPG_01116
Spizellomyces punctatus
SPPG_01116
I
sr14110
Sporisorium reilianum
sr14110
I
estExt_fgenesh1_pg.C_30124
Sporobolomyces roseus
estExt_fgenesh1_pg.C_30124
I
HMPREF1624_03486
Sporothrix schenckii
HMPREF1624_03486
N
PMAA_085950
Talaromyces marneffei
PMAA_085950
N
TSTA_121070
Talaromyces stipitatus
TSTA_121070
N
THITE_2123849
Thielavia terrestris
THITE_2123849
N
THITE_2123901
Thielavia terrestris
THITE_2123901
I
UCRPA7_905
Togninia minima
UCRPA7_905
N
VHEMI09490
Torrubiella hemipterigena
VHEMI09490
N
TDEL_0A03400
Torulaspora delbrueckii
TDEL_0A03400
I
estExt_fgeneshTM_pg.C_40576
Tremella mesenterica
estExt_fgeneshTM_pg.C_40576
I
GSTUM_00004466001
Tuber melanosporum
GSTUM_00004466001
N
M407DRAFT_66111
Tulasnella calospora
M407DRAFT_66111
I
UV8b_4500
Ustilaginoidea virens
UV8b_4500
N
UHOR_04781
Ustilago hordei
UHOR_04781
I
UM03053
Ustilago maydis
UM03053
I
VDBG_05547
Verticillium albo atrum
VDBG_05547
N
VDBG_05547
Verticillium alfalfae
VDBG_05547
N
BN7_3380
Wickerhamomyces ciferrii
BN7_3380
I
YALI0_D04785g
Yarrowia lipolytica
YALI0_D04785g
I
ZBAI_09477
Zygosaccharomyces bailii
ZBAI_09477
I
ZYRO0D11286g
Zygosaccharomyces rouxii
ZYRO0D11286g
I