CC1G_07617 (Coprinopsis cinerea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CC1G_07617 T326936_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.424 0.362
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.424 0.362
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAU89391 Sox 137 209

Links

Other Sox family TFs
Other Coprinopsis cinerea TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK27158.1 Cannabis sativa PK27158.1 I 0.000
PK10580.1 Cannabis sativa PK10580.1 I 0.000
Cla014322 Citrullus lanatus Cla014322 I 0.000
Cla006333 Citrullus lanatus Cla006333 I 0.000
Cucsa.251170 Cucumis sativus Cucsa.251170 I 0.000
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.000
GLYMA16G32540 Glycine max GLYMA16G32540 I 0.000
GLYMA09G27461 Glycine max GLYMA09G27461 I 0.000
MDP0000574222 Malus domestica MDP0000574222 I 0.000
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.000
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.000
MTR_6g464720 Medicago truncatula MTR_6g464720 I 0.000
mgf020918m Mimulus guttatus mgf020918m N 0.000
mgf026300m Mimulus guttatus mgf026300m N 0.000
mgf025532m Mimulus guttatus mgf025532m I 0.000
mgf024558m Mimulus guttatus mgf024558m N 0.000
mgf023854m Mimulus guttatus mgf023854m N 0.000
mgf023075m Mimulus guttatus mgf023075m I 0.000
mgf022608m Mimulus guttatus mgf022608m N 0.000
mgf021058m Mimulus guttatus mgf021058m N 0.000
mgf020639m Mimulus guttatus mgf020639m I 0.000
mgf020145m Mimulus guttatus mgf020145m N 0.000
mgf017475m Mimulus guttatus mgf017475m I 0.000
mgf013840m Mimulus guttatus mgf013840m N 0.000
mgf010954m Mimulus guttatus mgf010954m N 0.000
GSMUA_Achr7G00460_001 Musa acuminata GSMUA_Achr7G00460_001 I 0.000
GSMUA_Achr8G12280_001 Musa acuminata GSMUA_Achr8G12280_001 I 0.000
GSMUA_Achr11G07760_001 Musa acuminata GSMUA_Achr11G07760_001 I 0.000
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I 0.000
Pm018089 Prunus mume Pm018089 I 0.000
PRUPE_ppa014428mg Prunus persica PRUPE_ppa014428mg I 0.000
SapurV1A.0173s0340 Salix purpurea SapurV1A.0173s0340 I 0.000
SapurV1A.0833s0010 Salix purpurea SapurV1A.0833s0010 I 0.000