CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_303621
(
Daphnia pulex
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
DAPPUDRAFT_303621
T327325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX65503
Sox
197
265
PKKPLTSYMLFYMEQKDAVLEKQPGLGMTELSKIIAKMYHELSDRKKTKYSELAEKEKEAYQEKMKKFM
EFX65503
Sox
284
350
PPKPPTPFKLFSDEKMPKFVGEGMSLTEAREKCRDAYKELKDKQKLKWIYQALEQEPEFNEEMEKFK
EFX65503
Sox
382
448
DKPPNSGYSLFSKKLLSSNSLKQFETKERMTEISRLWKELSDEEKTSYNDKATQMNYAYKMKYASYL
EFX65503
Sox
521
587
IQKPNSSLQMFCNSNMDKYSSKHPKLTKQELTRLMAKEFAKLSEEKKKVYGNMAQKSKNEMSASSKK
Links
Other
Sox
family TFs
Other
Daphnia pulex
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI000805
Acyrthosiphon pisum
ACYPI000805
N
GB53235
Apis mellifera
GB53235
I
NV31351
Nasonia vitripennis
NV31351
I
PHUM420750
Pediculus humanus
PHUM420750
N
SMAR004372
Strigamia maritima
SMAR004372
N
L798_07371
Zootermopsis nevadensis
L798_07371
N