CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HBP1
(
Echinops telfairi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSETEG00000018542
T328000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN
NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.368
1.000
HBP1
M11299_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.368
1.000
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000015070
Sox
434
463
CKRPMNAFMLFAKKYRVEYTQMYPGKDNXX
Links
Other
Sox
family TFs
Other
Echinops telfairi
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI33447
Acyrthosiphon pisum
ACYPI33447
N