CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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smarce1
(
Takifugu rubripes
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSTRUG00000012899
T329317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000032680
Sox
64
132
PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYNDSLKAYH
ENSTRUP00000032681
Sox
66
134
PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYNDSLKAYH
ENSTRUP00000032682
Sox
31
99
PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYNDSLKAYH
Links
Other
Sox
family TFs
Other
Takifugu rubripes
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CORT_0F01630
Candida orthopsilosis
CORT_0F01630
N
0.000
CPAG_00496
Candida parapsilosis
CPAG_00496
N
0.000
KAFR_0J00690
Kazachstania africana
KAFR_0J00690
I
0.000
LALA0_S04e07426g
Lachancea lanzarotensis
LALA0_S04e07426g
I
0.000
NCAS_0D02540
Naumovozyma castellii
NCAS_0D02540
I
0.000
Scas_Contig521.2
Saccharomyces castellii
Scas_Contig521.2
I
0.000
TDEL_0E03910
Torulaspora delbrueckii
TDEL_0E03910
I
0.000
ZBAI_04454
Zygosaccharomyces bailii
ZBAI_04454
N
0.000
ZYRO0A10956g
Zygosaccharomyces rouxii
ZYRO0A10956g
N
0.000