GJ21981 (Drosophila virilis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 FBgn0209095 T329764_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pan
M06451_2.00 		Drosophila melanogaster
DWYCAAAD
HTTTGRWH		 B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432 		0.741 1.000
pan
M08428_2.00 		Drosophila melanogaster
WHNAAAVRNRSCGM
KCGSYNYBTTTNDW		 ChIP-chip
Mathelier et al.(2014)
MA0237.2 		0.741 1.000
pan
M11337_2.00 		Drosophila melanogaster
AAGATCAAAGG
CCTTTGATCTT		 Transfac
Matys et al.(2006)
I$TCF_1 		0.741 1.000
pan
M11338_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TCF_Q6 		0.741 1.000
Tcf7l2
M00198_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Tcf7l2_3461 		0.720 0.928
Tcf7l2
M02646_2.00 		Mus musculus
SATCAAAGN
NCTTTGATS		 SELEX
Hallikas et al.(2006)
Tcf4 		0.720 0.928
TCF7L2
M08167_2.00 		Homo sapiens
NVASWTCAAAGVVN
NBBCTTTGAWSTBN		 ChIP-seq
Mathelier et al.(2014)
MA0523.1 		0.720 0.928
TCF7L2
M09393_2.00 		Homo sapiens
DGCAGSTGKS
SMCASCTGCH		 Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C 		0.720 0.928
TCF7L2
M09394_2.00 		Homo sapiens
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A 		0.720 0.928
Tcf7l2
M09401_2.00 		Mus musculus
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A 		0.720 0.928
TCF7L2
M09638_2.00 		Homo sapiens
CCTTTGAWST
ASWTCAAAGG		 Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196 		0.720 0.928
TCF7L2
M11316_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_01 		0.720 0.928
TCF7L2
M11317_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_02 		0.720 0.928
TCF7L2
M11318_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5 		0.720 0.928
TCF7L2
M11319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF7L2_06 		0.720 0.928
Lef1
M00200_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Lef1_3504 		0.720 0.913
LEF1
M03511_2.00 		Homo sapiens
NRAGATCAAAGRVWW
WWBYCTTTGATCTYN		 SELEX
Jolma et al.(2013)
LEF1_1 		0.720 0.913
LEF1
M05771_2.00 		Homo sapiens
NSATCAAAS
STTTGATSN		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1 		0.720 0.913
LEF1
M05772_2.00 		Homo sapiens
WCATCGRGRCGCTGW
WCAGCGYCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2 		0.720 0.913
LEF1
M05775_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1 		0.720 0.913
LEF1
M05776_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2 		0.720 0.913
LEF1
M05895_2.00 		Homo sapiens
WTCAAAGNNN
NNNCTTTGAW		 SMiLE-seq
Isakova et al.(2017)
LEF1 		0.720 0.913
LEF1
M09392_2.00 		Homo sapiens
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A 		0.720 0.913
Lef1
M09402_2.00 		Mus musculus
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B 		0.720 0.913
LEF1
M11311_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q2_01 		0.720 0.913
LEF1
M11312_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q3 		0.720 0.913
LEF1
M11313_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q4 		0.720 0.913
LEF1
M11314_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5_01 		0.720 0.913
LEF1
M11315_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5 		0.720 0.913
LEF1
M05773_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1 		0.720 0.913
LEF1
M05774_2.00 		Homo sapiens
WCATCGRGGCGCTGW
WCAGCGCCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2 		0.720 0.913
LEF1
M05777_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1 		0.720 0.913
LEF1
M05778_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2 		0.720 0.913
Tcf7l1
M00207_2.00 		Mus musculus
NNNNWWDN
NHWWNNNN		 PBM
Badis et al.(2009)
Tcf3_3787 		0.720 0.870
TCF7L1
M03512_2.00 		Homo sapiens
AAAGATCAAAGG
CCTTTGATCTTT		 SELEX
Jolma et al.(2013)
TCF7L1_1 		0.720 0.870
TCF7L1
M05779_2.00 		Homo sapiens
RSATCAAAG
CTTTGATSY		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1 		0.720 0.870
TCF7L1
M05780_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2 		0.720 0.870
TCF7L1
M09395_2.00 		Homo sapiens
NBBCTTTGAWSTB
VASWTCAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B 		0.720 0.870
Tcf7l1
M09406_2.00 		Mus musculus
BBCTTTGAWST
ASWTCAAAGVV		 Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A 		0.720 0.870
Tcf7l1
M09407_2.00 		Mus musculus
NDGCAGSTGBB
VVCASCTGCHN		 Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A 		0.720 0.870
TCF7L1
M11320_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_01 		0.720 0.870
TCF7L1
M11321_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6_01 		0.720 0.870
TCF7L1
M11322_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6 		0.720 0.870
TCF7L1
M05781_2.00 		Homo sapiens
CTTTGATSY
RSATCAAAG		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1 		0.720 0.870
TCF7L1
M05782_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2 		0.720 0.870
Tcf7
M00193_2.00 		Mus musculus
HNHNNNNNN
NNNNNNDND		 PBM
Badis et al.(2009)
Tcf7_0950 		0.695 0.913
Tcf7
M03532_2.00 		Mus musculus
AAASATCAAAGV
BCTTTGATSTTT		 SELEX
Jolma et al.(2013)
Tcf7_1 		0.695 0.913
TCF7
M05755_2.00 		Homo sapiens
DSATCAAWS
SWTTGATSH		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1 		0.695 0.913
TCF7
M05756_2.00 		Homo sapiens
WCWKCGYCYCGWTGW
WCAWCGRGRCGMWGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2 		0.695 0.913
TCF7
M05890_2.00 		Homo sapiens
NNASATCAAASNN
NNSTTTGATSTNN		 SMiLE-seq
Isakova et al.(2017)
TCF7 		0.695 0.913
TCF7
M09386_2.00 		Homo sapiens
NBBCTTTSAWSTBNBN
NVNVASWTSAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A 		0.695 0.913
Tcf7
M09400_2.00 		Mus musculus
VVRVADSAAARVVVNV
BNBBBYTTTSHTBYBB		 Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A 		0.695 0.913
TCF7
M11294_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5_01 		0.695 0.913
TCF7
M11295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5 		0.695 0.913
TCF7
M05757_2.00 		Homo sapiens
RSATCAAAS
STTTGATSY		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1 		0.695 0.913
TCF7
M05758_2.00 		Homo sapiens
WCAWCGRGRCGMWGW
WCWKCGYCYCGWTGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2 		0.695 0.913
pop-1
M00712_2.00 		Caenorhabditis elegans
NNHDWVNNNN
NNNNBWHDNN		 PBM
Narasimhan et al.(2015)
pTH9135 		0.523 0.536
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0236398 Sox 275 343

Links

Other Sox family TFs
Other Drosophila virilis TFs

510 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG010381.1 Alligator sinensis Alligator_sinensis_CCG010381.1 I
AB04741.1 Alternaria brassicicola AB04741.1 I
Aqu1.225495 Amphimedon queenslandica Aqu1.225495 I
ENSAPLG00000010674 Anas platyrhynchos ENSAPLG00000010674 I
Afo_R011092 Aptenodytes forsteri Afo_R011092 I
Afo_R009272 Aptenodytes forsteri Afo_R009272 I
ATEG_05203 Aspergillus terreus CADATEAG00005116 I
ENSAMXG00000000335 Astyanax mexicanus ENSAMXG00000000335 I
COCC4DRAFT_49159 Bipolaris maydis COCC4DRAFT_49159 I
COCMIDRAFT_53102 Bipolaris oryzae COCMIDRAFT_53102 I
COCSADRAFT_107886 Bipolaris sorokiniana COCSADRAFT_107886 I
COCCADRAFT_44321 Bipolaris zeicola COCCADRAFT_44321 I
estExt_fgenesh2_pg.C_2210037 Branchiostoma floridae estExt_fgenesh2_pg.C_2210037 I
Brh_R000015 Buceros rhinoceros Brh_R000015 I
Brh_R010356 Buceros rhinoceros Brh_R010356 I
CBG25749 Caenorhabditis briggsae CBG25749 I
Aan_R015659 Calypte anna Aan_R015659 I
Aan_R003869 Calypte anna Aan_R003869 I
ENSCAFG00000010422 Canis familiaris ENSCAFG00000010422 I
CapteG49895 Capitella teleta CapteG49895 I
CapteG88319 Capitella teleta CapteG88319 I
CapteG70907 Capitella teleta CapteG70907 I
CapteG100741 Capitella teleta CapteG100741 I
ENSCSAG00000011743 Chlorocebus sabaeus ENSCSAG00000011743 I
Z519_11142 Cladophialophora bantiana Z519_11142 I
estExt_Genewise1.C_110663 Cochliobolus heterostrophus C5 estExt_Genewise1.C_110663 I
CCM_02544 Cordyceps militaris CCM_02544 I
CGI_10011802 Crassostrea gigas CGI_10011802 I
IRX3 Dasypus novemcinctus ENSDNOG00000012985 I
DILT_0000254701 Diphyllobothrium latum DILT_0000254701 I
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I
ECPE_0000388901 Echinostoma caproni ECPE_0000388901 I
D915_04768 Fasciola hepatica D915_04768 I
D915_05481 Fasciola hepatica D915_05481 I
D915_00592 Fasciola hepatica D915_00592 I
FFUJ_12565 Fusarium fujikuroi FFUJ_12565 I
FGRRES_07914 Fusarium graminearum FGRRES_07914 D
FGRRES_17555 Fusarium graminearum FGRRES_17555 I
FOXG_13545 Fusarium oxysporum FOXG_13545 I
irx7 Gasterosteus aculeatus ENSGACG00000011160 I
Gfo_R005354 Geospiza fortis Gfo_R005354 I
Gfo_R014865 Geospiza fortis Gfo_R014865 I
HMEL002096 Heliconius melpomene HMEL002096 I
HelroG138488 Helobdella robusta HelroG138488 I
HelroG153600 Helobdella robusta HelroG153600 I
HelroG171177 Helobdella robusta HelroG171177 I
TTAC_0000670801 Hydatigera taeniaeformis TTAC_0000670801 I
HmN_000922600 Hymenolepis microstoma HmN_000922600 I
HmN_000921700 Hymenolepis microstoma HmN_000921700 I
HNAJ_0001179801 Hymenolepis nana HNAJ_0001179801 I
ISCW017111 Ixodes scapularis ISCW017111 I
LEMA_P121770.1 Leptosphaeria maculans LEMA_P121770.1 N
ENSMEUG00000004557 Macropus eugenii ENSMEUG00000004557 I
ENSMPUG00000007638 Mustela putorius furo ENSMPUG00000007638 I
Myotis_brandtii_Irx1_10035798 Myotis brandtii Myotis_brandtii_Irx1_10035798 I
Ocbimv22006483m.g Octopus bimaculoides Ocbimv22006483m.g I
Ogr18478 Ophisaurus gracilis Ogr18478 I
ENSONIG00000018672 Oreochromis niloticus ENSONIG00000018672 I
ENSOANG00000029378 Ornithorhynchus anatinus ENSOANG00000029378 I
ENSOARG00000016067 Ovis aries ENSOARG00000016067 I
ENSPTRG00000039451 Pan troglodytes ENSPTRG00000039451 I
SNOG_06363 Phaeosphaeria nodorum SNOG_06363 I
ENSPFOG00000006638 Poecilia formosa ENSPFOG00000006638 I
ENSPFOG00000013469 Poecilia formosa ENSPFOG00000013469 I
MKX Procavia capensis ENSPCAG00000014719 I
PXEA_0002454601 Protopolystoma xenopodis PXEA_0002454601 I
PTT_11733 Pyrenophora teres PTT_11733 I
Irx3 Rattus norvegicus ENSRNOG00000011533 I
SSLN_0000846501 Schistocephalus solidus SSLN_0000846501 I
SCUD_0000714801 Schistosoma curassoni SCUD_0000714801 I
A_07284 Schistosoma haematobium A_07284 I
Sjc_0052220 Schistosoma japonicum Sjc_0052220 I
SMRZ_0000148301 Schistosoma margrebowiei SMRZ_0000148301 I
SMTD_0002243001 Schistosoma mattheei SMTD_0002243001 I
SETTUDRAFT_162538 Setosphaeria turcica SETTUDRAFT_162538 I
SPER_0001325101 Spirometra erinaceieuropaei SPER_0001325101 I
SNOG_06363 Stagonospora nodorum SNOG_06363 I
L596_g21727 Steinernema carpocapsae L596_g21727 I
L893_g31416 Steinernema glaseri L893_g31416 I
L898_g17064 Steinernema monticolum L898_g17064 I
L892_g27282 Steinernema scapterisci L892_g27282 I
SMAR007687 Strigamia maritima SMAR007687 I
SMAR002833 Strigamia maritima SMAR002833 I
ENSSSCG00000009724 Sus scrofa ENSSSCG00000009724 I
SMUV_0000063001 Syphacia muris SMUV_0000063001 I
TASK_0000658901 Taenia asiatica TASK_0000658901 I
TsM_000760900 Taenia solium TsM_000760900 I
irx7 Takifugu rubripes ENSTRUG00000007926 I
mkxb Takifugu rubripes ENSTRUG00000004166 I
mkxb Tetraodon nigroviridis ENSTNIG00000007881 I
MKX Tupaia belangeri ENSTBEG00000008150 I
Tal_R007088 Tyto alba Tal_R007088 I
ENSXMAG00000012663 Xiphophorus maculatus ENSXMAG00000012663 I
ENSXMAG00000006967 Xiphophorus maculatus ENSXMAG00000006967 I