fgenesh_scip_prom.28083.3150 (Phytophthora lateralis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 fgenesh_scip_prom.28083.3150 T329869_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.28083.3150 Sox 1132 1165

Links

Other Sox family TFs
Other Phytophthora lateralis TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I
AMTR_s00009p00148470 Amborella trichopoda AMTR_s00009p00148470 I
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I
ATERF13 Arabidopsis lyrata scaffold_403422.1 I
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I
ERF11 Arabidopsis thaliana AT1G28370 D
ERF13 Arabidopsis thaliana AT2G44840 D
ERF098 Arabidopsis thaliana AT3G23230 D
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I
Bo1g102220 Brassica oleracea Bo1g102220 I
Bo4g024140 Brassica oleracea Bo4g024140 I
Bo4g195220 Brassica oleracea Bo4g195220 I
Bo7g040810 Brassica oleracea Bo7g040810 I
Bo9g001020 Brassica oleracea Bo9g001020 I
Bra004873 Brassica rapa Bra004873 I
Bra014925 Brassica rapa Bra014925 I
Bra023748 Brassica rapa Bra023748 I
Bra037630 Brassica rapa Bra037630 I
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I
Carubv10005868m.g Capsella rubella Carubv10005868m.g I
Carubv10015406m.g Capsella rubella Carubv10015406m.g I
Carubv10023967m.g Capsella rubella Carubv10023967m.g I
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I
evm.TU.supercontig_44.74 Carica papaya evm.TU.supercontig_44.74 I
evm.TU.supercontig_50.28 Carica papaya evm.TU.supercontig_50.28 I
Ca_06032 Cicer arietinum Ca_06032 I
Ca_06034 Cicer arietinum Ca_06034 I
Ca_07755 Cicer arietinum Ca_07755 I
Ca_12080 Cicer arietinum Ca_12080 I
Ca_12218 Cicer arietinum Ca_12218 I
Cla007696 Citrullus lanatus Cla007696 I
Cla015064 Citrullus lanatus Cla015064 I
Cla015065 Citrullus lanatus Cla015065 I
Cla021383 Citrullus lanatus Cla021383 I
Cla021851 Citrullus lanatus Cla021851 I
Cla021852 Citrullus lanatus Cla021852 I
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I
Ciclev10007133m.g Citrus clementina Ciclev10007133m.g I
Ciclev10023546m.g Citrus clementina Ciclev10023546m.g I
Ciclev10023656m.g Citrus clementina Ciclev10023656m.g I
Ciclev10024451m.g Citrus clementina Ciclev10024451m.g I
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I
orange1.1g047241m.g Citrus sinensis orange1.1g047241m.g I
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I
Cucsa.129320 Cucumis sativus Cucsa.129320 I
Cucsa.255320 Cucumis sativus Cucsa.255320 I
Cucsa.255330 Cucumis sativus Cucsa.255330 I
Cucsa.260030 Cucumis sativus Cucsa.260030 I
Cucsa.260040 Cucumis sativus Cucsa.260040 I
Cucsa.383680 Cucumis sativus Cucsa.383680 I
Cucsa.388540 Cucumis sativus Cucsa.388540 I
Eucgr.B01537 Eucalyptus grandis Eucgr.B01537 I
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I
Eucgr.H03091 Eucalyptus grandis Eucgr.H03091 I
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I
gene08073-v1.0-hybrid Fragaria vesca gene08073-v1.0-hybrid I
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I
gene11440-v1.0-hybrid Fragaria vesca gene11440-v1.0-hybrid I
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I
GLYMA03G26394 Glycine max GLYMA03G26394 I
GLYMA03G26437 Glycine max GLYMA03G26437 I
GLYMA03G26520 Glycine max GLYMA03G26520 I
GLYMA03G31930 Glycine max GLYMA03G31930 I
GLYMA10G00990 Glycine max GLYMA10G00990 I
GLYMA10G04190 Glycine max GLYMA10G04190 I
GLYMA10G33070 Glycine max GLYMA10G33070 I
GLYMA13G18400 Glycine max GLYMA13G18400 I
GLYMA13G30720 Glycine max GLYMA13G30720 I
GLYMA15G08560 Glycine max GLYMA15G08560 I
GLYMA18G48741 Glycine max GLYMA18G48741 I
GLYMA19G34650 Glycine max GLYMA19G34650 I
GLYMA20G34560 Glycine max GLYMA20G34560 I
Gorai.001G176600 Gossypium raimondii Gorai.001G176600 I
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I
Gorai.006G249800 Gossypium raimondii Gorai.006G249800 I
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I
Gorai.011G172800 Gossypium raimondii Gorai.011G172800 I
LPERR02G21480 Leersia perrieri LPERR02G21480 I
LPERR03G03540 Leersia perrieri LPERR03G03540 I
LPERR04G03550 Leersia perrieri LPERR04G03550 I
LPERR09G16370 Leersia perrieri LPERR09G16370 I
LPERR10G08470 Leersia perrieri LPERR10G08470 I
Lus10004011.g Linum usitatissimum Lus10004011.g I
Lus10011830.g Linum usitatissimum Lus10011830.g I
Lus10011831.g Linum usitatissimum Lus10011831.g I
Lus10016209.g Linum usitatissimum Lus10016209.g I
Lus10016210.g Linum usitatissimum Lus10016210.g I
Lus10016212.g Linum usitatissimum Lus10016212.g I
Lus10016223.g Linum usitatissimum Lus10016223.g I
Lus10016224.g Linum usitatissimum Lus10016224.g I
Lus10016225.g Linum usitatissimum Lus10016225.g I
Lus10021196.g Linum usitatissimum Lus10021196.g I
Lus10022936.g Linum usitatissimum Lus10022936.g I
Lus10024883.g Linum usitatissimum Lus10024883.g I
Lus10025430.g Linum usitatissimum Lus10025430.g I
Lus10029318.g Linum usitatissimum Lus10029318.g I
Lus10029331.g Linum usitatissimum Lus10029331.g I
Lus10029333.g Linum usitatissimum Lus10029333.g I
Lus10029334.g Linum usitatissimum Lus10029334.g I
Lus10030261.g Linum usitatissimum Lus10030261.g I
Lus10033884.g Linum usitatissimum Lus10033884.g I
chr3.CM0080.190.nd Lotus japonicus chr3.CM0080.190.nd I
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I
CM1489.90.nc Lotus japonicus CM1489.90.nc I
LjSGA_028626.1 Lotus japonicus LjSGA_028626.1 I
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I
MDP0000286915 Malus domestica MDP0000286915 I
MDP0000312701 Malus domestica MDP0000312701 I
MDP0000830129 Malus domestica MDP0000830129 I
MDP0000930655 Malus domestica MDP0000930655 I
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I
cassava19881.m1 Manihot esculenta cassava19881.m1 I
cassava19882.m1 Manihot esculenta cassava19882.m1 I
cassava19883.m1 Manihot esculenta cassava19883.m1 I
cassava3323.m1 Manihot esculenta cassava3323.m1 I
cassava38508.m1 Manihot esculenta cassava38508.m1 I
cassava38545.m1 Manihot esculenta cassava38545.m1 I
cassava41615.m1 Manihot esculenta cassava41615.m1 I
cassava41639.m1 Manihot esculenta cassava41639.m1 I
cassava631.valid.m1 Manihot esculenta cassava631.valid.m1 I
MTR_1g070070 Medicago truncatula MTR_1g070070 I
MTR_1g074310 Medicago truncatula MTR_1g074310 I
MTR_2g015040 Medicago truncatula MTR_2g015040 I
MTR_4g088005 Medicago truncatula MTR_4g088005 I
MTR_5g085100 Medicago truncatula MTR_5g085100 I
MTR_7g081795 Medicago truncatula MTR_7g081795 I
MTR_7g081805 Medicago truncatula MTR_7g081805 I
MTR_7g081815 Medicago truncatula MTR_7g081815 I
MTR_7g096810 Medicago truncatula MTR_7g096810 I
MTR_8g006815 Medicago truncatula MTR_8g006815 I
MTR_8g006825 Medicago truncatula MTR_8g006825 I
MTR_8g006840 Medicago truncatula MTR_8g006840 I
mgf001695m Mimulus guttatus mgf001695m I
mgf021215m Mimulus guttatus mgf021215m I
mgf021973m Mimulus guttatus mgf021973m I
mgf026487m Mimulus guttatus mgf026487m I
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I
OBART02G26470 Oryza barthii OBART02G26470 I
OBART03G03890 Oryza barthii OBART03G03890 I
OBART04G05450 Oryza barthii OBART04G05450 I
OBART09G20380 Oryza barthii OBART09G20380 I
OBART10G11630 Oryza barthii OBART10G11630 I
OB04G14270 Oryza brachyantha OB04G14270 I
OB09G27120 Oryza brachyantha OB09G27120 I
ORGLA02G0226700 Oryza glaberrima ORGLA02G0226700 I
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I
ORGLA09G0166700 Oryza glaberrima ORGLA09G0166700 I
ORGLA10G0102500 Oryza glaberrima ORGLA10G0102500 I
OGLUM02G26870 Oryza glumaepatula OGLUM02G26870 I
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I
OGLUM09G21140 Oryza glumaepatula OGLUM09G21140 I
OGLUM10G11380 Oryza glumaepatula OGLUM10G11380 I
BGIOSGA008740 Oryza indica BGIOSGA008740 I
BGIOSGA011868 Oryza indica BGIOSGA011868 I
BGIOSGA015474 Oryza indica BGIOSGA015474 I
BGIOSGA029230 Oryza indica BGIOSGA029230 I
BGIOSGA031822 Oryza indica BGIOSGA031822 I
OLONG_005596 Oryza longistaminata OLONG_005596 I
OLONG_008277 Oryza longistaminata OLONG_008277 I
OLONG_027600 Oryza longistaminata OLONG_027600 I
OMERI03G03710 Oryza meridionalis OMERI03G03710 I
ONIVA01G39370 Oryza nivara ONIVA01G39370 I
ONIVA02G28840 Oryza nivara ONIVA02G28840 I
ONIVA03G03670 Oryza nivara ONIVA03G03670 I
ONIVA04G03680 Oryza nivara ONIVA04G03680 I
ONIVA10G10810 Oryza nivara ONIVA10G10810 I
OPUNC02G24090 Oryza punctata OPUNC02G24090 I
OPUNC03G03600 Oryza punctata OPUNC03G03600 I
OPUNC09G18680 Oryza punctata OPUNC09G18680 I
OPUNC10G09910 Oryza punctata OPUNC10G09910 I
ORUFI02G27860 Oryza rufipogon ORUFI02G27860 I
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I
ORUFI09G22030 Oryza rufipogon ORUFI09G22030 I
ORUFI10G12140 Oryza rufipogon ORUFI10G12140 I
OS03G0150200 Oryza sativa OS03G0150200 I
OS04G0257500 Oryza sativa OS04G0257500 I
OS09G0571700 Oryza sativa OS09G0571700 I
Pavir.Aa01181 Panicum virgatum Pavir.Aa01181 I
Pavir.Ab02473 Panicum virgatum Pavir.Ab02473 I
Pavir.Bb01308 Panicum virgatum Pavir.Bb01308 I
Pavir.Ia01823 Panicum virgatum Pavir.Ia01823 I
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I
Pavir.J22854 Panicum virgatum Pavir.J22854 I
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I
POPTR_0002s04030 Populus trichocarpa POPTR_0002s04030 I
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I
POPTR_0008s16600 Populus trichocarpa POPTR_0008s16600 I
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I
Pm009383 Prunus mume Pm009383 I
Pm017696 Prunus mume Pm017696 I
Pm017699 Prunus mume Pm017699 I
Pm018418 Prunus mume Pm018418 I
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I
PRUPE_ppa018601mg Prunus persica PRUPE_ppa018601mg I
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I
29584.m000235 Ricinus communis 29584.m000235 I
29603.m000509 Ricinus communis 29603.m000509 I
29603.m000510 Ricinus communis 29603.m000510 I
29900.m001559 Ricinus communis 29900.m001559 I
30174.m008755 Ricinus communis 30174.m008755 I
SapurV1A.0006s0860 Salix purpurea SapurV1A.0006s0860 I
SapurV1A.0006s0870 Salix purpurea SapurV1A.0006s0870 I
SapurV1A.0007s0960 Salix purpurea SapurV1A.0007s0960 I
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I
Si017790m.g Setaria italica Si017790m.g I
Si032391m.g Setaria italica Si032391m.g I
Si039310m.g Setaria italica Si039310m.g I
Si039759m.g Setaria italica Si039759m.g I
Solyc02g077370.1 Solanum lycopersicum Solyc02g077370.1 I
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I
Solyc09g089910.1 Solanum lycopersicum Solyc09g089910.1 I
Solyc09g089920.1 Solanum lycopersicum Solyc09g089920.1 I
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I
PGSC0003DMG400010724 Solanum tuberosum PGSC0003DMG400010724 I
PGSC0003DMG400017233 Solanum tuberosum PGSC0003DMG400017233 I
PGSC0003DMG400046646 Solanum tuberosum PGSC0003DMG400046646 I
Sb01g020555 Sorghum bicolor Sb01g020555 I
Sb01g046920 Sorghum bicolor Sb01g046920 I
TCM_004061 Theobroma cacao TCM_004061 I
TCM_004062 Theobroma cacao TCM_004062 I
TCM_005705 Theobroma cacao TCM_005705 I
TCM_005706 Theobroma cacao TCM_005706 I
TCM_005707 Theobroma cacao TCM_005707 I
TCM_020869 Theobroma cacao TCM_020869 I
TCM_020870 Theobroma cacao TCM_020870 I
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I
VIT_07s0005g03190 Vitis vinifera VIT_07s0005g03190 I
VIT_07s0005g03200 Vitis vinifera VIT_07s0005g03200 I
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I
AC198979.4_FG009 Zea mays AC198979.4_FG009 I
GRMZM2G009598 Zea mays GRMZM2G009598 I
GRMZM2G024871 Zea mays GRMZM2G024871 I
GRMZM2G057386 Zea mays GRMZM2G057386 I
GRMZM2G060517 Zea mays GRMZM2G060517 I
GRMZM2G474326 Zea mays GRMZM2G474326 I