GSMUA_Achr5G11630_001 (Musa acuminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GSMUA_Achr5G11630_001 T330368_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.428 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P11630_001 Sox 45 114

Links

Other Sox family TFs
Other Musa acuminata TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004258 Ailuropoda melanoleuca ENSAMEG00000004258 I
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I
Alligator_sinensis_CCG014066.1 Alligator sinensis Alligator_sinensis_CCG014066.1 I
ENSAPLG00000008859 Anas platyrhynchos ENSAPLG00000008859 I
ZNF281 Anolis carolinensis ENSACAG00000006286 I
Afo_R004007 Aptenodytes forsteri Afo_R004007 I
Afo_R008251 Aptenodytes forsteri Afo_R008251 I
ENSAMXG00000006245 Astyanax mexicanus ENSAMXG00000006245 I
ENSAMXG00000015147 Astyanax mexicanus ENSAMXG00000015147 I
ENSP00000356322-D1 Bos grunniens ENSP00000356322-D1 I
ENSP00000420448-D1 Bos grunniens ENSP00000420448-D1 I
ZNF148 Bos taurus ENSBTAG00000040031 I
Brh_R001493 Buceros rhinoceros Brh_R001493 I
Brh_R005182 Buceros rhinoceros Brh_R005182 I
ZNF281 Callithrix jacchus ENSCJAG00000005104 I
ZNF148 Callithrix jacchus ENSCJAG00000006741 I
Aan_R003668 Calypte anna Aan_R003668 I
Aan_R014758 Calypte anna Aan_R014758 I
ZNF148 Canis familiaris ENSCAFG00000012574 I
Cmyd_10009615 Chelonia mydas Cmyd_10009615 I
ENSCSAG00000000250 Chlorocebus sabaeus ENSCSAG00000000250 I
ZNF281 Choloepus hoffmanni ENSCHOG00000004074 I
znf281a Danio rerio ENSDARG00000000567 I
znf281b Danio rerio ENSDARG00000035910 I
ZNF148 Dasypus novemcinctus ENSDNOG00000000280 I
ZNF281 Dasypus novemcinctus ENSDNOG00000016981 I
Zfp281 Dipodomys ordii ENSDORG00000002833 I
ENSDORG00000003955 Dipodomys ordii ENSDORG00000003955 I
ZNF148 Echinops telfairi ENSETEG00000002856 I
ZNF148 Equus caballus ENSECAG00000013557 I
ZNF281 Equus caballus ENSECAG00000024354 I
ZNF281 Erinaceus europaeus ENSEEUG00000011443 I
ZNF148 Felis catus ENSFCAG00000026852 I
ZNF281 Felis catus ENSFCAG00000028447 I
ENSFALG00000013520 Ficedula albicollis ENSFALG00000013520 I
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I
ENSGMOG00000001704 Gadus morhua ENSGMOG00000001704 I
ENSGMOG00000008854 Gadus morhua ENSGMOG00000008854 I
ZNF148 Gallus gallus ENSGALG00000012049 I
znf281b Gasterosteus aculeatus ENSGACG00000006858 I
znf281a Gasterosteus aculeatus ENSGACG00000009536 I
Gfo_R001184 Geospiza fortis Gfo_R001184 I
Gfo_R006633 Geospiza fortis Gfo_R006633 I
ZNF281 Gorilla gorilla ENSGGOG00000010349 I
ZNF281 Homo sapiens ENSG00000162702 D
ZNF148 Homo sapiens ENSG00000163848 D
ENSSTOG00000027082 Ictidomys tridecemlineatus ENSSTOG00000027082 I
ENSLACG00000014572 Latimeria chalumnae ENSLACG00000014572 I
ENSLOCG00000002769 Lepisosteus oculatus ENSLOCG00000002769 I
ENSLOCG00000011584 Lepisosteus oculatus ENSLOCG00000011584 I
ZNF148 Loxodonta africana ENSLAFG00000016025 I
ENSP00000356322 Macaca fascicularis ENSP00000356322 I
ENSP00000420448 Macaca fascicularis ENSP00000420448 I
ZNF148 Macaca mulatta ENSMMUG00000001169 I
ZNF281 Macaca mulatta ENSMMUG00000007334 I
ENSMEUG00000011709 Macropus eugenii ENSMEUG00000011709 I
ZNF281 Microcebus murinus ENSMICG00000001070 I
ZNF281 Monodelphis domestica ENSMODG00000012840 I
ZNF148 Monodelphis domestica ENSMODG00000018374 I
ENSMPUG00000004162 Mustela putorius furo ENSMPUG00000004162 I
ENSMPUG00000019246 Mustela putorius furo ENSMPUG00000019246 I
Zfp148 Mus musculus ENSMUSG00000022811 I
Zfp281 Mus musculus ENSMUSG00000041483 D
ENSNLEG00000000773 Nomascus leucogenys ENSNLEG00000000773 I
ENSNLEG00000018067 Nomascus leucogenys ENSNLEG00000018067 I
Ogr00130 Ophisaurus gracilis Ogr00130 I
ENSONIG00000000839 Oreochromis niloticus ENSONIG00000000839 I
ENSONIG00000004240 Oreochromis niloticus ENSONIG00000004240 I
ENSONIG00000016453 Oreochromis niloticus ENSONIG00000016453 I
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I
ZNF281 Oryctolagus cuniculus ENSOCUG00000010120 I
znf281a Oryzias latipes ENSORLG00000002799 I
znf281b Oryzias latipes ENSORLG00000005292 I
ZNF281 Otolemur garnettii ENSOGAG00000010366 I
ZNF148 Otolemur garnettii ENSOGAG00000013652 I
ENSOARG00000020237 Ovis aries ENSOARG00000020237 I
ZNF281 Pan troglodytes ENSPTRG00000015318 I
ENSPANG00000004284 Papio anubis ENSPANG00000004284 I
ENSPANG00000017386 Papio anubis ENSPANG00000017386 I
ENSPSIG00000003614 Pelodiscus sinensis ENSPSIG00000003614 I
ENSPFOG00000000851 Poecilia formosa ENSPFOG00000000851 I
ENSPFOG00000004115 Poecilia formosa ENSPFOG00000004115 I
ENSPFOG00000008024 Poecilia formosa ENSPFOG00000008024 I
Pvit_14619 Pogona vitticeps Pvit_14619 I
ENSPPYG00000013462 Pongo abelii ENSPPYG00000013462 I
ZNF148 Pteropus vampyrus ENSPVAG00000006133 I
Zfp148 Rattus norvegicus ENSRNOG00000001789 I
Zfp281 Rattus norvegicus ENSRNOG00000058643 I
ENSSHAG00000013855 Sarcophilus harrisii ENSSHAG00000013855 I
ZNF148 Sorex araneus ENSSARG00000007257 I
ZNF281 Sus scrofa ENSSSCG00000010911 I
ZNF148 Sus scrofa ENSSSCG00000011858 I
ZNF148 Taeniopygia guttata ENSTGUG00000004010 I
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I
znf281b Takifugu rubripes ENSTRUG00000008207 I
znf281a Takifugu rubripes ENSTRUG00000016619 I
ENSTSYG00000007604 Tarsius syrichta ENSTSYG00000007604 I
znf281a Tetraodon nigroviridis ENSTNIG00000016430 I
znf281b Tetraodon nigroviridis ENSTNIG00000018917 I
ZNF148 Tupaia belangeri ENSTBEG00000008435 I
ZNF281 Tursiops truncatus ENSTTRG00000004326 I
ZNF148 Tursiops truncatus ENSTTRG00000014714 I
Tal_R010113 Tyto alba Tal_R010113 I
Tal_R010256 Tyto alba Tal_R010256 I
znf281 Xenopus tropicalis XB-GENE-5933312 I
znf148 Xenopus tropicalis XB-GENE-996852 I