Phatr3_J48554 (Phaeodactylum tricornutum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phatr3_J48554 T331927_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J48554.p1 Sox 237 258
Phatr3_J48554.p1 Sox 273 335

Links

Other Sox family TFs
Other Phaeodactylum tricornutum TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_04405 Capronia coronata A1O1_04405 N 0.000
A1O3_01643 Capronia epimyces A1O3_01643 N 0.000
PV04_09870 Capronia semiimmersa PV04_09870 N 0.000
Z519_00836 Cladophialophora bantiana Z519_00836 N 0.000
G647_09184 Cladophialophora carrionii G647_09184 N 0.000
PV07_05366 Cladophialophora immunda PV07_05366 N 0.000
A1O5_00887 Cladophialophora psammophila A1O5_00887 N 0.000
A1O7_09244 Cladophialophora yegresii A1O7_09244 N 0.000
HMPREF1541_05733 Cyphellophora europaea HMPREF1541_05733 N 0.000
DOTSEDRAFT_165097 Dothistroma septosporum DOTSEDRAFT_165097 N 0.000
EPUS_07712 Endocarpon pusillum EPUS_07712 N 0.000
A1O9_11832 Exophiala aquamarina A1O9_11832 N 0.000
HMPREF1120_08054 Exophiala dermatitidis HMPREF1120_08054 N 0.000
PV11_05484 Exophiala sideris PV11_05484 N 0.000
PV08_07688 Exophiala spinifera PV08_07688 N 0.000
Z517_06792 Fonsecaea pedrosoi Z517_06792 N 0.000
M7I_5209 Glarea lozoyensis M7I_5209 N 0.000
GMDG_01999 Pseudogymnoascus destructans GMDG_01999 N 0.000
V499_03352 Pseudogymnoascus pannorum V499_03352 N 0.000
Z518_07282 Rhinocladiella mackenziei Z518_07282 N 0.000
SEPMUDRAFT_146449 Sphaerulina musiva SEPMUDRAFT_146449 N 0.000
PV09_04501 Verruconis gallopava PV09_04501 N 0.000