PSEUBRA_SCAF20g03069 (Pseudozyma brasiliensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PSEUBRA_SCAF20g03069 T332210_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.456 0.408
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EST07312 Sox 13 61

Links

Other Sox family TFs
Other Pseudozyma brasiliensis TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAG_00993 Allomyces macrogynus AMAG_00993 I 0.460
AMAG_02504 Allomyces macrogynus AMAG_02504 I 0.466
M378DRAFT_228709 Amanita muscaria M378DRAFT_228709 N 0.433
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.422
Aquca_006_00412 Aquilegia coerulea Aquca_006_00412 I 0.447
INO Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002152 I 0.456
INO Arabidopsis thaliana AT1G23420 D 0.456
Bostr.12659s0203 Boechera stricta Bostr.12659s0203 I 0.456
BOTBODRAFT_110075 Botryobasidium botryosum BOTBODRAFT_110075 N 0.496
BOTBODRAFT_39377 Botryobasidium botryosum BOTBODRAFT_39377 I 0.453
BRADI1G69900 Brachypodium distachyon BRADI1G69900 I 0.434
Bo5g039580 Brassica oleracea Bo5g039580 I 0.456
Bo7g056180 Brassica oleracea Bo7g056180 I 0.456
Bra012373 Brassica rapa Bra012373 I 0.456
Bra024599 Brassica rapa Bra024599 I 0.456
Cagra.0605s0067 Capsella grandiflora Cagra.0605s0067 I 0.456
Carubv10012024m.g Capsella rubella Carubv10012024m.g I 0.456
evm.TU.supercontig_69.72 Carica papaya evm.TU.supercontig_69.72 I 0.428
Ca_21472 Cicer arietinum Ca_21472 I 0.456
Cla000824 Citrullus lanatus Cla000824 I 0.461
Cla010239 Citrullus lanatus Cla010239 I 0.460
orange1.1g037247m.g Citrus sinensis orange1.1g037247m.g I 0.460
CND03770 Cryptococcus neoformans CND03770 I 0.520
Cucsa.394330 Cucumis sativus Cucsa.394330 I 0.461
DACRYDRAFT_54873 Dacryopinax sp DACRYDRAFT_54873 I 0.497
Thhalv10008669m.g Eutrema salsugineum Thhalv10008669m.g I 0.456
GALMADRAFT_234655 Galerina marginata GALMADRAFT_234655 N 0.443
GLYMA04G10125 Glycine max GLYMA04G10125 I 0.489
GLYMA06G10110 Glycine max GLYMA06G10110 I 0.426
GLYMA08G39290 Glycine max GLYMA08G39290 I 0.460
GLYMA18G19720 Glycine max GLYMA18G19720 I 0.460
GUITHDRAFT_146350 Guillardia theta GUITHDRAFT_146350 I 0.427
GUITHDRAFT_163519 Guillardia theta GUITHDRAFT_163519 I 0.419
JAAARDRAFT_119170 Jaapia argillacea JAAARDRAFT_119170 I 0.438
LPERR03G07620 Leersia perrieri LPERR03G07620 I 0.434
Lus10013028.g Linum usitatissimum Lus10013028.g I 0.460
Lus10029135.g Linum usitatissimum Lus10029135.g I 0.460
chr2.CM0008.270.nc Lotus japonicus chr2.CM0008.270.nc I 0.460
MDP0000126221 Malus domestica MDP0000126221 I 0.426
MDP0000263713 Malus domestica MDP0000263713 I 0.426
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.422
cassava27370.m1 Manihot esculenta cassava27370.m1 I 0.460
cassava41595.m1 Manihot esculenta cassava41595.m1 I 0.460
MTR_5g034030 Medicago truncatula MTR_5g034030 I 0.456
MVLG_01899 Microbotryum violaceum MVLG_01899 N 0.431
AZW_EuGene.0200010417 Micromonas sp RCC299 AZW_EuGene.0200010417 I 0.420
mgf023167m Mimulus guttatus mgf023167m I 0.427
E5Q_04235 Mixia osmundae E5Q_04235 I 0.562
E5Q_04236 Mixia osmundae E5Q_04236 I 0.562
GSMUA_Achr1G04480_001 Musa acuminata GSMUA_Achr1G04480_001 I 0.427
GSMUA_Achr1G24490_001 Musa acuminata GSMUA_Achr1G24490_001 I 0.427
GSMUA_Achr1G27150_001 Musa acuminata GSMUA_Achr1G27150_001 I 0.427
GSMUA_Achr3G15060_001 Musa acuminata GSMUA_Achr3G15060_001 I 0.422
GSMUA_Achr3G25290_001 Musa acuminata GSMUA_Achr3G25290_001 I 0.434
GSMUA_Achr4G01430_001 Musa acuminata GSMUA_Achr4G01430_001 I 0.434
GSMUA_Achr5G08930_001 Musa acuminata GSMUA_Achr5G08930_001 I 0.434
GSMUA_Achr6G24550_001 Musa acuminata GSMUA_Achr6G24550_001 I 0.434
GSMUA_Achr8G04340_001 Musa acuminata GSMUA_Achr8G04340_001 I 0.434
GSMUA_Achr8G04750_001 Musa acuminata GSMUA_Achr8G04750_001 I 0.422
GSMUA_Achr8G26600_001 Musa acuminata GSMUA_Achr8G26600_001 I 0.422
e_gw1.8.519.1 Neurospora discreta e_gw1.8.519.1 N 0.451
OBART03G08320 Oryza barthii OBART03G08320 I 0.434
OB03G18700 Oryza brachyantha OB03G18700 I 0.434
ORGLA03G0081000 Oryza glaberrima ORGLA03G0081000 I 0.434
OGLUM03G08460 Oryza glumaepatula OGLUM03G08460 I 0.434
BGIOSGA012115 Oryza indica BGIOSGA012115 I 0.434
OLONG_009200 Oryza longistaminata OLONG_009200 I 0.434
OMERI03G08070 Oryza meridionalis OMERI03G08070 I 0.434
ONIVA03G09180 Oryza nivara ONIVA03G09180 I 0.434
OPUNC03G08080 Oryza punctata OPUNC03G08080 I 0.434
ORUFI03G08400 Oryza rufipogon ORUFI03G08400 I 0.434
OS03G0215200 Oryza sativa OS03G0215200 I 0.434
Pavir.Ia04690 Panicum virgatum Pavir.Ia04690 I 0.434
Pavir.Ib00755 Panicum virgatum Pavir.Ib00755 I 0.434
PDK_20s1325902g001 Phoenix dactylifera PDK_20s1325902g001 I 0.434
PDK_20s1781371g001 Phoenix dactylifera PDK_20s1781371g001 I 0.449
PILCRDRAFT_822980 Piloderma croceum PILCRDRAFT_822980 I 0.488
PLEOSDRAFT_155914 Pleurotus ostreatus PLEOSDRAFT_155914 I 0.427
POPTR_0008s19330 Populus trichocarpa POPTR_0008s19330 I 0.450
POPTR_0010s05220 Populus trichocarpa POPTR_0010s05220 I 0.460
Pm006709 Prunus mume Pm006709 I 0.426
PRUPE_ppa023883mg Prunus persica PRUPE_ppa023883mg I 0.426
PAN0_018d5604 Pseudozyma antarctica PAN0_018d5604 I 0.649
PaG_05633 Pseudozyma aphidis PaG_05633 I 0.649
PFL1_06190 Pseudozyma flocculosa PFL1_06190 I 0.449
GLOINDRAFT_337448 Rhizophagus irregularis GLOINDRAFT_337448 I 0.451
GLOINDRAFT_342259 Rhizophagus irregularis GLOINDRAFT_342259 I 0.481
GLOINDRAFT_347422 Rhizophagus irregularis GLOINDRAFT_347422 I 0.417
RHTO_05868 Rhodosporidium toruloides RHTO_05868 I 0.547
SapurV1A.0069s0070 Salix purpurea SapurV1A.0069s0070 I 0.460
SapurV1A.0269s0230 Salix purpurea SapurV1A.0269s0230 I 0.460
Si037608m.g Setaria italica Si037608m.g I 0.434
Solyc05g005240.1 Solanum lycopersicum Solyc05g005240.1 I 0.422
Sb01g042850 Sorghum bicolor Sb01g042850 I 0.434
M422DRAFT_175451 Sphaerobolus stellatus M422DRAFT_175451 I 0.451
SPPG_01639 Spizellomyces punctatus SPPG_01639 I 0.457
SPPG_09438 Spizellomyces punctatus SPPG_09438 I 0.442
sr16632 Sporisorium reilianum sr16632 I 0.582
K437DRAFT_256012 Tilletiaria anomala K437DRAFT_256012 I 0.504
Traes_4AS_BE972A2661 Triticum aestivum Traes_4AS_BE972A2661 I 0.434
Traes_4AS_BE972A266 Triticum aestivum Traes_4AS_BE972A266 I 0.434
Traes_4BL_34FE2C7F2 Triticum aestivum Traes_4BL_34FE2C7F2 I 0.434
TRIUR3_31693 Triticum urartu TRIUR3_31693 I 0.434
M407DRAFT_126438 Tulasnella calospora M407DRAFT_126438 I 0.497
M407DRAFT_28999 Tulasnella calospora M407DRAFT_28999 N 0.511
UHOR_08529 Ustilago hordei UHOR_08529 I 0.649
UM06001 Ustilago maydis UM06001 I 0.683
INO Vitis vinifera VIT_01s0127g00330 I 0.426
GRMZM2G046829 Zea mays GRMZM2G046829 I 0.443
GRMZM2G088309 Zea mays GRMZM2G088309 I 0.434
GRMZM2G102218 Zea mays GRMZM2G102218 I 0.434