SBOR_5988 (Sclerotinia borealis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SBOR_5988 T332431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.635 0.710
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.635 0.710
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.635 0.696
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.635 0.696
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESZ93610 Sox 25 99

Links

Other Sox family TFs
Other Sclerotinia borealis TFs

338 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_150877 Agaricus bisporus AGABI2DRAFT_150877 N
BOTBODRAFT_99872 Botryobasidium botryosum BOTBODRAFT_99872 N
CERSUDRAFT_119121 Ceriporiopsis subvermispora CERSUDRAFT_119121 N
CC1G_09335 Coprinopsis cinerea CC1G_09335 N
DACRYDRAFT_114563 Dacryopinax sp DACRYDRAFT_114563 N
FOMPIDRAFT_1034579 Fomitopsis pinicola FOMPIDRAFT_1034579 N
GALMADRAFT_97916 Galerina marginata GALMADRAFT_97916 N
GLOTRDRAFT_120398 Gloeophyllum trabeum GLOTRDRAFT_120398 N
M413DRAFT_446301 Hebeloma cylindrosporum M413DRAFT_446301 N
estExt_fgenesh2_pm.C_30290 Heterobasidion annosum estExt_fgenesh2_pm.C_30290 N
HETIRDRAFT_476261 Heterobasidion irregulare HETIRDRAFT_476261 N
JAAARDRAFT_35324 Jaapia argillacea JAAARDRAFT_35324 N
K443DRAFT_662219 Laccaria amethystina K443DRAFT_662219 N
LACBIDRAFT_313642 Laccaria bicolor LACBIDRAFT_313642 N
Moror_6251 Moniliophthora roreri Moror_6251 N
PAXRUDRAFT_825716 Paxillus rubicundulus PAXRUDRAFT_825716 N
PHACADRAFT_174788 Phanerochaete carnosa PHACADRAFT_174788 N
PHLGIDRAFT_99458 Phlebiopsis gigantea PHLGIDRAFT_99458 N
PILCRDRAFT_824046 Piloderma croceum PILCRDRAFT_824046 N
PISMIDRAFT_28197 Pisolithus microcarpus PISMIDRAFT_28197 N
M404DRAFT_995995 Pisolithus tinctorius M404DRAFT_995995 N
PLEOSDRAFT_1112903 Pleurotus ostreatus PLEOSDRAFT_1112903 N
POSPLDRAFT_104953 Postia placenta POSPLDRAFT_104953 N
POSPLDRAFT_104955 Postia placenta POSPLDRAFT_104955 N
V565_091980 Rhizoctonia solani V565_091980 N
SCLCIDRAFT_13363 Scleroderma citrinum SCLCIDRAFT_13363 N
M408DRAFT_328654 Serendipita vermifera M408DRAFT_328654 N
SERLA73DRAFT_122259 Serpula lacrymans SERLA73DRAFT_122259 N
M422DRAFT_173033 Sphaerobolus stellatus M422DRAFT_173033 N
CY34DRAFT_468895 Suillus luteus CY34DRAFT_468895 N
M407DRAFT_20239 Tulasnella calospora M407DRAFT_20239 N