SMAR000790 (Strigamia maritima)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SMAR000790 T332608_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.557 0.565
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR000790-PA Sox 141 209

Links

Other Sox family TFs
Other Strigamia maritima TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g07853 Acanthocheilonema viteae nAv.1.0.1.g07853 N
ALUE_0001959001 Ascaris lumbricoides ALUE_0001959001 N
ASU_02634 Ascaris suum ASU_02634 N
nDi.2.2.2.g05583 Dirofilaria immitis nDi.2.2.2.g05583 N
DME_0000018601 Dracunculus medinensis DME_0000018601 N
DME_0000289501 Dracunculus medinensis DME_0000289501 N
DME_0000422901 Dracunculus medinensis DME_0000422901 N
EEL_0000033801 Elaeophora elaphi EEL_0000033801 N
EVEC_0000147801 Enterobius vermicularis EVEC_0000147801 N
GPUH_0000010501 Gongylonema pulchrum GPUH_0000010501 N
nLs.2.1.2.g07297 Litomosoides sigmodontis nLs.2.1.2.g07297 N
LOAG_06280 Loa loa LOAG_06280 N
OFLC_0001425201 Onchocerca flexuosa OFLC_0001425201 N
nOo.2.0.1.g03373 Onchocerca ochengi nOo.2.0.1.g03373 N
WBGene00243529 Onchocerca volvulus WBGene00243529 N
SMUV_0000637801 Syphacia muris SMUV_0000637801 N
TCLT_0000520501 Thelazia callipaeda TCLT_0000520501 N
TCNE_0001502501 Toxocara canis TCNE_0001502501 N
WUBG_02251 Wuchereria bancrofti WUBG_02251 N