SS1G_01161 (Sclerotinia sclerotiorum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SS1G_01161 T332769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.595 0.667
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.533 0.406
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.533 0.406
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.446 0.304
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.446 0.304
NCU02326
M02489_2.00 		Neurospora crassa
NNNNTATTRWWAN
NTWWYAATANNNN		 PBM
Weirauch et al.(2014)
pTH8922 		0.424 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDN96236 Sox 203 271

Links

Other Sox family TFs
Other Sclerotinia sclerotiorum TFs

341 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HpaG800701 Hyaloperonospora arabidopsidis HpaG800701 N
estExt_fgenesh1_kg.C_8130011 Phytophthora capsici estExt_fgenesh1_kg.C_8130011 N
fgenesh_scip_prom.46568.337 Phytophthora kernoviae fgenesh_scip_prom.46568.337 N
F443_16639 Phytophthora parasitica F443_16639 N
Physo138655 Phytophthora sojae Physo138655 N
maker-piw_contig_308-snap-gene-0.9 Pythium iwayamai maker-piw_contig_308-snap-gene-0.9 N
PYU1_G004814 Pythium ultimum PYU1_G004814 N