CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIATDRAFT_33998
(
Trichoderma atroviride
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
TRIATDRAFT_33998
T333043_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.431
0.449
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.431
0.449
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK42953
Sox
129
197
IPRPPNAYILYRKDRHNIVKAANPGITNNEISQILGRAWNKESREVRQKYKEMSEAIKVALLEKHPDYQ
Links
Other
Sox
family TFs
Other
Trichoderma atroviride
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_06979
Allomyces macrogynus
AMAG_06979
I
0.417
AFUA_3G06170
Aspergillus fumigatus
CADAFUAG00005478
I
0.418
MAT2
Aspergillus nidulans
CADANIAG00005695
I
0.453
EURHEDRAFT_401871
Aspergillus ruber
EURHEDRAFT_401871
I
0.473
BAUCODRAFT_67524
Baudoinia compniacensis
BAUCODRAFT_67524
I
0.416
BGHDH14_bgh03211
Blumeria graminis
BGHDH14_bgh03211
I
0.461
A1O1_07971
Capronia coronata
A1O1_07971
I
0.472
CHGG_03580
Chaetomium globosum
CHGG_03580
N
0.559
CTHT_0001070
Chaetomium thermophilum
CTHT_0001070
N
0.578
A1O5_13042
Cladophialophora psammophila
A1O5_13042
I
0.501
CIMG_00406
Coccidioides immitis
CIMG_00406
I
0.444
CPC735_058040
Coccidioides posadasii
CPC735_058040
I
0.444
CFIO01_09392
Colletotrichum fioriniae
CFIO01_09392
I
0.507
CGGC5_3189
Colletotrichum gloeosporioides
CGGC5_3189
I
0.540
GLRG_04643
Colletotrichum graminicola
GLRG_04643
I
0.481
CH063_09403
Colletotrichum higginsianum
CH063_09403
I
0.497
Cob_13096
Colletotrichum orbiculare
Cob_13096
N
0.601
CSUB01_02050
Colletotrichum sublineola
CSUB01_02050
I
0.481
DOTSEDRAFT_192196
Dothistroma septosporum
DOTSEDRAFT_192196
I
0.434
EPUS_08057
Endocarpon pusillum
EPUS_08057
I
0.499
UCREL1_2891
Eutypa lata
UCREL1_2891
N
0.427
A1O9_08621
Exophiala aquamarina
A1O9_08621
I
0.482
PV06_08316
Exophiala oligosperma
PV06_08316
I
0.466
PV08_07043
Exophiala spinifera
PV08_07043
I
0.448
FFUJ_05685
Fusarium fujikuroi
FFUJ_05685
I
0.554
FGRRES_08893
Fusarium graminearum
FGRRES_08893
I
0.565
GGTG_04697
Gaeumannomyces graminis
GGTG_04697
I
0.591
CMQ_5376
Grosmannia clavigera
CMQ_5376
I
0.542
HCBG_05263
Histoplasma capsulatum
HCBG_05263
I
0.449
MGG_02978
Magnaporthe oryzae
MGG_02978
I
0.557
MAC_05350
Metarhizium acridum
MAC_05350
I
0.705
MAM_01740
Metarhizium album
MAM_01740
I
0.693
MBR_08193
Metarhizium brunneum
MBR_08193
I
0.705
MAJ_11317
Metarhizium majus
MAJ_11317
I
0.705
Ocbimv22024932m.g
Octopus bimaculoides
Ocbimv22024932m.g
I
0.430
OCS_00196
Ophiocordyceps sinensis
OCS_00196
I
0.700
F503_03625
Ophiostoma piceae uamh
F503_03625
I
0.572
F503_06490
Ophiostoma piceae uamh
F503_06490
I
0.450
PABG_05778
Paracoccidioides brasiliensis
PABG_05778
I
0.482
Pc22g06930
Penicillium chrysogenum
Pc22g06930
I
0.450
PITC_068990
Penicillium italicum
PITC_068990
I
0.416
PITC_063570
Penicillium italicum
PITC_063570
I
0.522
PMAA_003200
Penicillium marneffei
PMAA_003200
I
0.433
PDE_06698
Penicillium oxalicum
PDE_06698
I
0.416
PDE_01613
Penicillium oxalicum
PDE_01613
I
0.425
PCH_Pc22g06930
Penicillium rubens
PCH_Pc22g06930
I
0.450
U727_00429890111
Penicillium solitum
U727_00429890111
I
0.522
U727_00431010161
Penicillium solitum
U727_00431010161
I
0.416
gw1.41.85.1
Phycomyces blakesleeanus
gw1.41.85.1
I
0.425
PODANS_1_20590
Podospora anserina
PODANS_1_20590
I
0.591
GLOINDRAFT_60750
Rhizophagus irregularis
GLOINDRAFT_60750
I
0.437
GLOINDRAFT_44046
Rhizophagus irregularis
GLOINDRAFT_44046
I
0.443
GLOINDRAFT_50485
Rhizophagus irregularis
GLOINDRAFT_50485
I
0.444
GLOINDRAFT_81724
Rhizophagus irregularis
GLOINDRAFT_81724
I
0.437
SOCG_02523
Schizosaccharomyces octosporus
SOCG_02523
I
0.433
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
0.431
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
0.431
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
0.431
SBOR_9074
Sclerotinia borealis
SBOR_9074
I
0.515
SS1G_04006
Sclerotinia sclerotiorum
SS1G_04006
I
0.515
SETTUDRAFT_174840
Setosphaeria turcica
SETTUDRAFT_174840
I
0.439
SMAC_05404
Sordaria macrospora
SMAC_05404
I
0.563
SMAC_07212
Sordaria macrospora
SMAC_07212
I
0.446
SPBR_08948
Sporothrix brasiliensis
SPBR_08948
I
0.572
HMPREF1624_05084
Sporothrix schenckii
HMPREF1624_05084
I
0.572
S40288_01998
Stachybotrys chartarum
S40288_01998
I
0.704
SMUV_0000981301
Syphacia muris
SMUV_0000981301
I
0.420
PMAA_003200
Talaromyces marneffei
PMAA_003200
I
0.433
TSTA_008530
Talaromyces stipitatus
TSTA_008530
I
0.466
VHEMI07104
Torrubiella hemipterigena
VHEMI07104
I
0.585
BN946_scf184994.g60
Trametes cinnabarina
BN946_scf184994.g60
N
0.429
TRIREDRAFT_124341
Trichoderma reesei
TRIREDRAFT_124341
I
0.735
TRIVIDRAFT_52649
Trichoderma virens
TRIVIDRAFT_52649
N
0.486
TEQG_04869
Trichophyton equinum
TEQG_04869
I
0.433
H101_00568
Trichophyton interdigitale
H101_00568
I
0.433
UV8b_1585
Ustilaginoidea virens
UV8b_1585
I
0.705
VDAG_02444
Verticillium dahliae
VDAG_02444
I
0.632