CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000420500
(
Macaca fascicularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ENSP00000420500
T333727_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN
NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.741
1.000
HBP1
M11299_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.741
1.000
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000420500
Sox
434
501
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDC
Links
Other
Sox
family TFs
Other
Macaca fascicularis
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV07_09598
Cladophialophora immunda
PV07_09598
N