fgenesh2_pg.9_#_75 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.9_#_75 T334136_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.9_#_75 Sox 34 65
fgenesh2_pg.9_#_75 Sox 76 132

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_034210 Acremonium chrysogenum ACRE_034210 I 0.000
AB03286.1 Alternaria brassicicola AB03286.1 I 0.000
ARB_03643 Arthroderma benhamiae ARB_03643 I 0.000
CADAORAG00008810 Aspergillus oryzae CADAORAG00008810 I 0.000
EURHEDRAFT_518989 Aspergillus ruber EURHEDRAFT_518989 I 0.000
M437DRAFT_76008 Aureobasidium melanogenum M437DRAFT_76008 I 0.000
M438DRAFT_282148 Aureobasidium pullulans M438DRAFT_282148 I 0.000
AUEXF2481DRAFT_5486 Aureobasidium subglaciale AUEXF2481DRAFT_5486 I 0.000
BAUCODRAFT_249790 Baudoinia compniacensis BAUCODRAFT_249790 I 0.000
BBA_06988 Beauveria bassiana BBA_06988 I 0.000
COCC4DRAFT_163657 Bipolaris maydis COCC4DRAFT_163657 I 0.000
COCMIDRAFT_80851 Bipolaris oryzae COCMIDRAFT_80851 I 0.000
COCSADRAFT_93076 Bipolaris sorokiniana COCSADRAFT_93076 I 0.000
COCVIDRAFT_31288 Bipolaris victoriae COCVIDRAFT_31288 I 0.000
COCCADRAFT_112191 Bipolaris zeicola COCCADRAFT_112191 I 0.000
Bcin15g00200 Botrytis cinerea Bcin15g00200 I 0.000
CTHT_0003600 Chaetomium thermophilum CTHT_0003600 I 0.000
CPUR_01747 Claviceps purpurea CPUR_01747 I 0.000
estExt_Genewise1.C_30429 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30429 I 0.000
CFIO01_11126 Colletotrichum fioriniae CFIO01_11126 I 0.000
CGGC5_2437 Colletotrichum gloeosporioides CGGC5_2437 I 0.000
GLRG_03942 Colletotrichum graminicola GLRG_03942 I 0.000
CH063_05360 Colletotrichum higginsianum CH063_05360 I 0.000
Cob_01611 Colletotrichum orbiculare Cob_01611 I 0.000
CSUB01_01401 Colletotrichum sublineola CSUB01_01401 I 0.000
W97_01199 Coniosporium apollinis W97_01199 I 0.000
CCM_01128 Cordyceps militaris CCM_01128 I 0.000
DOTSEDRAFT_164596 Dothistroma septosporum DOTSEDRAFT_164596 I 0.000
EV44_g2223 Erysiphe necator EV44_g2223 I 0.000
UCREL1_941 Eutypa lata UCREL1_941 I 0.000
PV10_03189 Exophiala mesophila PV10_03189 I 0.000
Z517_02456 Fonsecaea pedrosoi Z517_02456 I 0.000
FFUJ_01507 Fusarium fujikuroi FFUJ_01507 I 0.000
FGRRES_01313 Fusarium graminearum FGRRES_01313 I 0.000
FOXG_00073 Fusarium oxysporum FOXG_00073 I 0.000
FPSE_03349 Fusarium pseudograminearum FPSE_03349 I 0.000
FVEG_01443 Fusarium verticillioides FVEG_01443 I 0.000
GGTG_01216 Gaeumannomyces graminis GGTG_01216 I 0.000
CMQ_566 Grosmannia clavigera CMQ_566 I 0.000
LEMA_P026860.1 Leptosphaeria maculans LEMA_P026860.1 I 0.000
MPH_10926 Macrophomina phaseolina MPH_10926 I 0.000
MGG_00342 Magnaporthe oryzae MGG_00342 I 0.000
MAPG_08236 Magnaporthe poae MAPG_08236 I 0.000
MAC_07148 Metarhizium acridum MAC_07148 I 0.000
MAM_03661 Metarhizium album MAM_03661 I 0.000
MANI_013653 Metarhizium anisopliae MANI_013653 I 0.000
MBR_06029 Metarhizium brunneum MBR_06029 I 0.000
MGU_06448 Metarhizium guizhouense MGU_06448 I 0.000
MAJ_04559 Metarhizium majus MAJ_04559 I 0.000
X797_005785 Metarhizium robertsii X797_005785 I 0.000
MYCTH_2297066 Myceliophthora thermophila MYCTH_2297066 I 0.000
estExt_fgenesh1_pg.C_10877 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10877 I 0.000
estExt_Genewise1Plus.C_chr_12913 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12913 I 0.000
NCU07379 Neurospora crassa NCU07379 D 0.000
estExt_fgenesh3_kg.C_40226 Neurospora discreta estExt_fgenesh3_kg.C_40226 I 0.000
NEUTE1DRAFT_105272 Neurospora tetrasperma NEUTE1DRAFT_105272 I 0.000
OIDMADRAFT_202703 Oidiodendron maius OIDMADRAFT_202703 I 0.000
OCS_06036 Ophiocordyceps sinensis OCS_06036 I 0.000
F503_06775 Ophiostoma piceae uamh F503_06775 I 0.000
PDIP_02990 Penicillium digitatum PDIP_02990 I 0.000
PITC_020790 Penicillium italicum PITC_020790 I 0.000
U727_00431281371 Penicillium solitum U727_00431281371 I 0.000
PFICI_01432 Pestalotiopsis fici PFICI_01432 I 0.000
PODANS_1_17900 Podospora anserina PODANS_1_17900 I 0.000
MYCFIDRAFT_86007 Pseudocercospora fijiensis MYCFIDRAFT_86007 I 0.000
GMDG_08213 Pseudogymnoascus destructans GMDG_08213 I 0.000
PTT_09501 Pyrenophora teres PTT_09501 I 0.000
PTRG_07994 Pyrenophora triticirepentis PTRG_07994 I 0.000
SBOR_9585 Sclerotinia borealis SBOR_9585 I 0.000
SETTUDRAFT_169120 Setosphaeria turcica SETTUDRAFT_169120 I 0.000
SMAC_00328 Sordaria macrospora SMAC_00328 I 0.000
SEPMUDRAFT_103885 Sphaerulina musiva SEPMUDRAFT_103885 I 0.000
SPBR_07829 Sporothrix brasiliensis SPBR_07829 I 0.000
HMPREF1624_07695 Sporothrix schenckii HMPREF1624_07695 I 0.000
S40288_06814 Stachybotrys chartarum S40288_06814 I 0.000
S40285_05984 Stachybotrys chlorohalonata S40285_05984 I 0.000
SNOG_04391 Stagonospora nodorum SNOG_04391 I 0.000
THITE_2112534 Thielavia terrestris THITE_2112534 I 0.000
UCRPA7_4041 Togninia minima UCRPA7_4041 I 0.000
VHEMI02403 Torrubiella hemipterigena VHEMI02403 I 0.000
TRIATDRAFT_301441 Trichoderma atroviride TRIATDRAFT_301441 I 0.000
TRIREDRAFT_57840 Trichoderma reesei TRIREDRAFT_57840 I 0.000
TRIVIDRAFT_227332 Trichoderma virens TRIVIDRAFT_227332 I 0.000
TEQG_00005 Trichophyton equinum TEQG_00005 I 0.000
H101_02270 Trichophyton interdigitale H101_02270 I 0.000
H102_06775 Trichophyton rubrum H102_06775 I 0.000
H105_06815 Trichophyton soudanense H105_06815 I 0.000
TESG_03658 Trichophyton tonsurans TESG_03658 I 0.000
TRV_01964 Trichophyton verrucosum TRV_01964 I 0.000
GSTUM_00001612001 Tuber melanosporum GSTUM_00001612001 I 0.000
PV09_01645 Verruconis gallopava PV09_01645 I 0.000
VDBG_06054 Verticillium albo atrum VDBG_06054 I 0.000
VDBG_06054 Verticillium alfalfae VDBG_06054 I 0.000
VDAG_03214 Verticillium dahliae VDAG_03214 I 0.000
Mycgr3G66896 Zymoseptoria tritici Mycgr3G66896 I 0.000