CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.6.218.1
(
Phycomyces blakesleeanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
gw1.6.218.1
T334256_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.6.218.1
Sox
12
80
PKHPMSGFLFFAGSVRQEIALQRPSASVGDVSKIIAGKWRELTDAERNPWCLRATEDKGRYAREMQEFM
Links
Other
Sox
family TFs
Other
Phycomyces blakesleeanus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF21952
Drosophila ananassae
FBgn0098951
I
GG12614
Drosophila erecta
FBgn0104902
I
gt
Drosophila melanogaster
FBgn0001150
D
GI15181
Drosophila mojavensis
FBgn0137931
I
GL14307
Drosophila persimilis
FBgn0151912
I
GA20715
Drosophila pseudoobscura
FBgn0080706
I
GM18880
Drosophila sechellia
FBgn0173783
I
GJ17061
Drosophila virilis
FBgn0204238
I
GK17868
Drosophila willistoni
FBgn0219867
I
GE16945
Drosophila yakuba
FBgn0234433
I
MDOA011241
Musca domestica
MDOA011241
I