estExt_fgenesh1_pm.C_110129 (Coccomyxa subellipsoidea C169)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh1_pm.C_110129 T334454_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
53934 Sox 67 136

Links

Other Sox family TFs
Other Coccomyxa subellipsoidea C169 TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_00556 Ancylostoma ceylanicum ANCCEY_00556 N
ACOC_0000250201 Angiostrongylus costaricensis ACOC_0000250201 N
BTMF_0000180701 Brugia timori BTMF_0000180701 N
BXY_0902500 Bursaphelenchus xylophilus BXY_0902500 N
DICVIV_04780 Dictyocaulus viviparus DICVIV_04780 N
nDi.2.2.2.g08137 Dirofilaria immitis nDi.2.2.2.g08137 N
DME_0000790101 Dracunculus medinensis DME_0000790101 N
EEL_0001004901 Elaeophora elaphi EEL_0001004901 N
HCOI00981900 Haemonchus contortus HCOI00981900 N
HPLM_0000734701 Haemonchus placei HPLM_0000734701 N
maker-nMf.1.1.scaf03581-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf03581-augustus-gene-0.6 N
maker-nMf.1.1.scaf01421-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf01421-snap-gene-0.8 N
Minc16567 Meloidogyne incognita Minc16567 N
OESDEN_12940 Oesophagostomum dentatum OESDEN_12940 N
OFLC_0001390101 Onchocerca flexuosa OFLC_0001390101 N
OFLC_0000545801 Onchocerca flexuosa OFLC_0000545801 N
WBGene00244828 Onchocerca volvulus WBGene00244828 N
PTRK_0001373600 Parastrongyloides trichosuri PTRK_0001373600 N
nRc.2.0.1.g14648 Romanomermis culicivorax nRc.2.0.1.g14648 N
L596_g6742 Steinernema carpocapsae L596_g6742 N
L889_g33285 Steinernema feltiae L889_g33285 N
L893_g10062 Steinernema glaseri L893_g10062 N
L898_g19329 Steinernema monticolum L898_g19329 N
L892_g5885 Steinernema scapterisci L892_g5885 N
SMUV_0000679801 Syphacia muris SMUV_0000679801 N
TCLT_0000846601 Thelazia callipaeda TCLT_0000846601 N
WUBG_06180 Wuchereria bancrofti WUBG_06180 N
WUBG_03674 Wuchereria bancrofti WUBG_03674 N