EuGene.0200010054 (Micromonas sp RCC299)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 EuGene.0200010054 T334476_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
55677 Sox 673 741

Links

Other Sox family TFs
Other Micromonas sp RCC299 TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I 0.446
evm.TU.supercontig_365.4 Carica papaya evm.TU.supercontig_365.4 I 0.420
Ca_04825 Cicer arietinum Ca_04825 I 0.420
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.420
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.477
Lus10028298.g Linum usitatissimum Lus10028298.g I 0.430
Lus10035511.g Linum usitatissimum Lus10035511.g I 0.428
Lus10040192.g Linum usitatissimum Lus10040192.g I 0.430
BGIOSGA023639 Oryza indica BGIOSGA023639 I 0.426
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.445
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.445
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.445
29600.m000548 Ricinus communis 29600.m000548 I 0.415
TCM_042534 Theobroma cacao TCM_042534 I 0.425