CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10027787.g
(
Linum usitatissimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Lus10027787.g
T334573_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10027787
Sox
56
86
PKRPPTAFFVFLEEFRKTFKKENPNANSVSA
Lus10027787
Sox
82
110
NSVSAEKAPYEAKAGKKKDEYGELMNAYN
Links
Other
Sox
family TFs
Other
Linum usitatissimum
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZFP64
Callithrix jacchus
ENSCJAG00000000596
I
0.000
ZFP64
Gorilla gorilla
ENSGGOG00000012030
I
0.000
ZFP64
Homo sapiens
ENSG00000020256
D
0.000
ZFP64
Loxodonta africana
ENSLAFG00000022960
I
0.000
Zfp64
Mus musculus
ENSMUSG00000027551
I
0.000
ENSPANG00000021108
Papio anubis
ENSPANG00000021108
I
0.000
ENSPPYG00000011139
Pongo abelii
ENSPPYG00000011139
I
0.000
ZFP64
Sus scrofa
ENSSSCG00000007481
I
0.000