SMU15029809 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15029809 T335024_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15029809 Sox 20 82
SMU15029809 Sox 101 167

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014714 Ailuropoda melanoleuca ENSAMEG00000014714 I
ENSAMEG00000014843 Ailuropoda melanoleuca ENSAMEG00000014843 I
Alligator_sinensis_CCG018001.1 Alligator sinensis Alligator_sinensis_CCG018001.1 I
ENSAPLG00000004386 Anas platyrhynchos ENSAPLG00000004386 I
HLF Anolis carolinensis ENSACAG00000017417 I
Afo_R002997 Aptenodytes forsteri Afo_R002997 I
ENSAMXG00000009417 Astyanax mexicanus ENSAMXG00000009417 I
ENSAMXG00000016053 Astyanax mexicanus ENSAMXG00000016053 I
ENSBTAP00000008682-D1 Bos grunniens ENSBTAP00000008682-D1 I
ENSBTAP00000008883-D1 Bos grunniens ENSBTAP00000008883-D1 I
HLF Bos taurus ENSBTAG00000006618 I
DBP Bos taurus ENSBTAG00000006754 I
Brh_R008067 Buceros rhinoceros Brh_R008067 I
DBP Callithrix jacchus ENSCJAG00000000360 I
HLF Callithrix jacchus ENSCJAG00000011298 I
Aan_R004902 Calypte anna Aan_R004902 I
DBP Canis familiaris ENSCAFG00000003928 I
HLF Canis familiaris ENSCAFG00000030851 I
ENSCPOG00000011000 Cavia porcellus ENSCPOG00000011000 I
DBP Cavia porcellus ENSCPOG00000019616 I
Cmyd_10013489 Chelonia mydas Cmyd_10013489 I
ENSCSAG00000002831 Chlorocebus sabaeus ENSCSAG00000002831 I
ENSCSAG00000005557 Chlorocebus sabaeus ENSCSAG00000005557 I
ENSCHOG00000001396 Choloepus hoffmanni ENSCHOG00000001396 I
dbpb Danio rerio ENSDARG00000057652 N
dbpa Danio rerio ENSDARG00000063014 I
DBP Dasypus novemcinctus ENSDNOG00000016868 I
Dbp Dipodomys ordii ENSDORG00000010599 I
ENSDORG00000012644 Dipodomys ordii ENSDORG00000012644 I
HLF Echinops telfairi ENSETEG00000017670 I
DBP Equus caballus ENSECAG00000014275 I
HLF Equus caballus ENSECAG00000016953 I
HLF Erinaceus europaeus ENSEEUG00000010964 I
HLF Felis catus ENSFCAG00000022556 I
ENSFCAG00000030886 Felis catus ENSFCAG00000030886 I
ENSFALG00000002265 Ficedula albicollis ENSFALG00000002265 I
ENSGMOG00000004797 Gadus morhua ENSGMOG00000004797 N
HLF Gallus gallus ENSGALG00000003059 I
tefb Gasterosteus aculeatus ENSGACG00000007628 I
ENSGACG00000010676 Gasterosteus aculeatus ENSGACG00000010676 I
Gfo_R006518 Geospiza fortis Gfo_R006518 I
DBP Gorilla gorilla ENSGGOG00000001444 I
HLF Gorilla gorilla ENSGGOG00000006075 I
HHAL005759-PA Halyomorpha halys HHAL005759-PA I
DBP Homo sapiens ENSG00000105516 D
HLF Homo sapiens ENSG00000108924 D
ENSSTOG00000024246 Ictidomys tridecemlineatus ENSSTOG00000024246 I
ENSSTOG00000029018 Ictidomys tridecemlineatus ENSSTOG00000029018 I
ENSLACG00000006062 Latimeria chalumnae ENSLACG00000006062 I
ENSLACG00000012726 Latimeria chalumnae ENSLACG00000012726 I
ENSLOCG00000011595 Lepisosteus oculatus ENSLOCG00000011595 I
ENSLOCG00000012233 Lepisosteus oculatus ENSLOCG00000012233 I
DBP Loxodonta africana ENSLAFG00000013079 I
HLF Loxodonta africana ENSLAFG00000016475 I
ENSP00000222122 Macaca fascicularis ENSP00000222122 I
ENSP00000226067 Macaca fascicularis ENSP00000226067 I
DBP Macaca mulatta ENSMMUG00000022160 I
HLF Macaca mulatta ENSMMUG00000022627 I
ENSMEUG00000000663 Macropus eugenii ENSMEUG00000000663 I
ENSMEUG00000016384 Macropus eugenii ENSMEUG00000016384 I
ENSMICG00000002860 Microcebus murinus ENSMICG00000002860 I
ENSMICG00000016323 Microcebus murinus ENSMICG00000016323 I
HLF Monodelphis domestica ENSMODG00000014851 I
ENSMPUG00000003854 Mustela putorius furo ENSMPUG00000003854 I
ENSMPUG00000015400 Mustela putorius furo ENSMPUG00000015400 I
Hlf Mus musculus ENSMUSG00000003949 D
Dbp Mus musculus ENSMUSG00000059824 D
Myotis_brandtii_DBP_10017602 Myotis brandtii Myotis_brandtii_DBP_10017602 I
Myotis_brandtii_Hlf_10020713 Myotis brandtii Myotis_brandtii_Hlf_10020713 I
HLF Myotis lucifugus ENSMLUG00000007393 I
DBP Myotis lucifugus ENSMLUG00000025433 I
ENSNLEG00000004551 Nomascus leucogenys ENSNLEG00000004551 I
ENSNLEG00000007993 Nomascus leucogenys ENSNLEG00000007993 I
HLF Ochotona princeps ENSOPRG00000004195 I
Ogr00037 Ophisaurus gracilis Ogr00037 I
Ogr12886 Ophisaurus gracilis Ogr12886 I
ENSONIG00000007041 Oreochromis niloticus ENSONIG00000007041 I
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I
ENSONIG00000012778 Oreochromis niloticus ENSONIG00000012778 I
ENSONIG00000019079 Oreochromis niloticus ENSONIG00000019079 I
HLF Oryctolagus cuniculus ENSOCUG00000010547 I
hlfa Oryzias latipes ENSORLG00000000969 I
ENSORLG00000011412 Oryzias latipes ENSORLG00000011412 I
tefb Oryzias latipes ENSORLG00000014144 I
HLF Otolemur garnettii ENSOGAG00000007056 I
DBP Otolemur garnettii ENSOGAG00000034399 I
ENSOARG00000011967 Ovis aries ENSOARG00000011967 I
HLF Pan troglodytes ENSPTRG00000009424 I
DBP Pan troglodytes ENSPTRG00000011247 I
ENSPANG00000015471 Papio anubis ENSPANG00000015471 I
ENSPANG00000022360 Papio anubis ENSPANG00000022360 I
ENSPSIG00000015238 Pelodiscus sinensis ENSPSIG00000015238 I
ENSPSIG00000016356 Pelodiscus sinensis ENSPSIG00000016356 I
ENSPFOG00000004560 Poecilia formosa ENSPFOG00000004560 I
ENSPFOG00000007430 Poecilia formosa ENSPFOG00000007430 I
ENSPFOG00000010189 Poecilia formosa ENSPFOG00000010189 I
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I
Pvit_00680 Pogona vitticeps Pvit_00680 I
Pvit_12136 Pogona vitticeps Pvit_12136 I
ENSPPYG00000008257 Pongo abelii ENSPPYG00000008257 I
DBP Procavia capensis ENSPCAG00000011426 I
HLF Pteropus vampyrus ENSPVAG00000007461 I
Hlf Rattus norvegicus ENSRNOG00000002456 I
Dbp Rattus norvegicus ENSRNOG00000021027 I
ENSSHAG00000015304 Sarcophilus harrisii ENSSHAG00000015304 I
ENSSARG00000013841 Sorex araneus ENSSARG00000013841 I
DBP Sus scrofa ENSSSCG00000003148 I
ENSSSCG00000024294 Sus scrofa ENSSSCG00000024294 I
HLF Taeniopygia guttata ENSTGUG00000009478 I
tefb Takifugu rubripes ENSTRUG00000003565 I
ENSTRUG00000007098 Takifugu rubripes ENSTRUG00000007098 I
ENSTRUG00000003893 Takifugu rubripes ENSTRUG00000003893 I
ENSTSYG00000009210 Tarsius syrichta ENSTSYG00000009210 I
ENSTNIG00000004400 Tetraodon nigroviridis ENSTNIG00000004400 I
ENSTNIG00000008098 Tetraodon nigroviridis ENSTNIG00000008098 I
HLF Tupaia belangeri ENSTBEG00000006958 I
HLF Tursiops truncatus ENSTTRG00000007194 I
DBP Tursiops truncatus ENSTTRG00000008191 I
Tal_R009182 Tyto alba Tal_R009182 I
dbp Xenopus tropicalis XB-GENE-5995286 I
ENSXMAG00000012054 Xiphophorus maculatus ENSXMAG00000012054 I
ENSXMAG00000014158 Xiphophorus maculatus ENSXMAG00000014158 I