CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshTM_pg.C_10542
(
Tremella mesenterica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgeneshTM_pg.C_10542
T335213_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshTM_pg.C_10542
Sox
213
235
TPRPPNAWILYRSDKLKAIAAGE
estExt_fgeneshTM_pg.C_10542
Sox
304
345
VSIKKSIPGYKFQPLRRADKIKLREEREREREALRRERDQSR
Links
Other
Sox
family TFs
Other
Tremella mesenterica
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_003910
Acremonium chrysogenum
ACRE_003910
N
NechaG90666
Fusarium solani
NechaG90666
N
MANI_014902
Metarhizium anisopliae
MANI_014902
N
MBR_07925
Metarhizium brunneum
MBR_07925
N
MGU_09271
Metarhizium guizhouense
MGU_09271
N
MAJ_04742
Metarhizium majus
MAJ_04742
N
X797_007977
Metarhizium robertsii
X797_007977
N
fgenesh1_pm.sca_18_chr2_1_0000070
Nectria haematococca
fgenesh1_pm.sca_18_chr2_1_0000070
N
OCS_01082
Ophiocordyceps sinensis
OCS_01082
N
SAPIO_CDS0751
Scedosporium apiospermum
SAPIO_CDS0751
N
VHEMI09332
Torrubiella hemipterigena
VHEMI09332
N
TRIATDRAFT_280339
Trichoderma atroviride
TRIATDRAFT_280339
N
TRIVIDRAFT_44455
Trichoderma virens
TRIVIDRAFT_44455
N