CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshCV_pg.C_scaffold_15000034
(
Chlorella vulgaris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
fgeneshCV_pg.C_scaffold_15000034
T335234_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshCV_pg.C_scaffold_15000034
Sox
185
253
VKRARSAYIFFGAEKRAAVKAENPTLSFGELTKKLGEMWKGISDAEKAPYEAMASEDKNRAGTERAEAK
fgeneshCV_pg.C_scaffold_15000034
Sox
257
315
KLFCDRHRQQIKDENADAGFGEITRKLAAAWKEITEEDKANYNKQHEELKANLPASNAS
Links
Other
Sox
family TFs
Other
Chlorella vulgaris
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000671
Anopheles albimanus
AALB000671
N
AARA008607
Anopheles arabiensis
AARA008607
N
AATE019876
Anopheles atroparvus
AATE019876
N
ACHR008175
Anopheles christyi
ACHR008175
N
ACOM027331
Anopheles coluzzii
ACOM027331
N
ACUA016254
Anopheles culicifacies
ACUA016254
N
ADIR011324
Anopheles dirus
ADIR011324
N
AFAF001738
Anopheles farauti
AFAF001738
N
AFUN000564
Anopheles funestus
AFUN000564
N
AGAP009066
Anopheles gambiae
AGAP009066
N
AMAM014954
Anopheles maculatus
AMAM014954
N
AMEC016629
Anopheles melas
AMEC016629
N
AMEM004408
Anopheles merus
AMEM004408
N
AMIN009611
Anopheles minimus
AMIN009611
N
AQUA004170
Anopheles quadriannulatus
AQUA004170
N
ASIS014530
Anopheles sinensis
ASIS014530
N
ASTEI07215
Anopheles stephensi
ASTEI07215
N