LjSGA_040316.1 (Lotus japonicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 LjSGA_040316.1 T335264_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_040316.1 Sox 78 126

Links

Other Sox family TFs
Other Lotus japonicus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_189431 Agaricus bisporus AGABI2DRAFT_189431 N
M378DRAFT_6232 Amanita muscaria M378DRAFT_6232 N
CC1G_06539 Coprinopsis cinerea CC1G_06539 N
FOMPIDRAFT_1115920 Fomitopsis pinicola FOMPIDRAFT_1115920 N
GALMADRAFT_109196 Galerina marginata GALMADRAFT_109196 N
GLOTRDRAFT_112955 Gloeophyllum trabeum GLOTRDRAFT_112955 N
M413DRAFT_22142 Hebeloma cylindrosporum M413DRAFT_22142 N
Genemark.209_g Heterobasidion annosum Genemark.209_g N
HETIRDRAFT_307860 Heterobasidion irregulare HETIRDRAFT_307860 N
JAAARDRAFT_53352 Jaapia argillacea JAAARDRAFT_53352 N
K443DRAFT_673496 Laccaria amethystina K443DRAFT_673496 N
LACBIDRAFT_301156 Laccaria bicolor LACBIDRAFT_301156 N
Moror_16007 Moniliophthora roreri Moror_16007 N
PAXRUDRAFT_822699 Paxillus rubicundulus PAXRUDRAFT_822699 N
PHACADRAFT_204842 Phanerochaete carnosa PHACADRAFT_204842 N
fgenesh1_pg.C_scaffold_13000030 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_13000030 N
PHLGIDRAFT_76399 Phlebiopsis gigantea PHLGIDRAFT_76399 N
PISMIDRAFT_6278 Pisolithus microcarpus PISMIDRAFT_6278 N
M404DRAFT_134354 Pisolithus tinctorius M404DRAFT_134354 N
PLEOSDRAFT_155843 Pleurotus ostreatus PLEOSDRAFT_155843 N
SCHCODRAFT_104000 Schizophyllum commune SCHCODRAFT_104000 N
SERLA73DRAFT_68203 Serpula lacrymans SERLA73DRAFT_68203 N